Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-643 |
| Cow position: | chr20:14592618-14592023 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 157-256 |
| Cow position: | chr20:22631344-22631243 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 157-631 |
| Cow position: | chr20:33132285-33132742 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 311 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 74 |
| Conread position: | 184-634 |
| Cow position: | chr20:37911364-37910920 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 310-811 |
| Cow position: | chr20:22631015-22630524 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 323, 18 |
| Conread position: | 404-631 |
| Cow position: | chr20:1511545-1511759 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 408-612 |
| Cow position: | chr20:649156-649361 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 86 |
| Conread position: | 408-628 |
| Cow position: | chr20:35251775-35251559 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 408-648 |
| Cow position: | chr20:33098429-33098185 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 164, 86 |
| Conread position: | 408-654 |
| Cow position: | chr20:24340081-24340329 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 167, 85 |
| Conread position: | 419-654 |
| Cow position: | chr20:13124577-13124821 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 72, 171 |
| Conread position: | 419-654 |
| Cow position: | chr20:37059403-37059163 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 124, 166 |
| Conread position: | 420-600 |
| Cow position: | chr20:38031942-38032123 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 155, 78 |
| Conread position: | 420-606 |
| Cow position: | chr20:35434794-35434612 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 121, 66 |
| Conread position: | 420-626 |
| Cow position: | chr20:23921750-23921543 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 124, 66 |
| Conread position: | 420-655 |
| Cow position: | chr20:22681917-22682143 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 154, 60 |
| Conread position: | 425-631 |
| Cow position: | chr20:19030513-19030719 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 77 |
| Conread position: | 426-652 |
| Cow position: | chr20:36326131-36325903 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 427-654 |
| Cow position: | chr20:8297812-8298041 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 147, 70 |
| Conread position: | 429-655 |
| Cow position: | chr20:10508135-10508364 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 105, 157 |
| Conread position: | 440-654 |
| Cow position: | chr20:19490464-19490674 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 137 |
| Conread position: | 454-629 |
| Cow position: | chr20:35181739-35181571 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 454-653 |
| Cow position: | chr20:33667491-33667687 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 179, 86 |
Show alignments to all cow chromosomes.