Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-644 |
| Cow position: | chr23:26270799-26270196 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 59-810 |
| Cow position: | chr23:9727162-9727927 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 164 |
| Conread position: | 157-619 |
| Cow position: | chr23:22279091-22278642 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 313 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 157-655 |
| Cow position: | chr23:33449402-33449893 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 157-812 |
| Cow position: | chr23:2537853-2537203 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 214 |
| Conread position: | 158-432 |
| Cow position: | chr23:12972949-12972673 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 6 |
| Conread position: | 163-257 |
| Cow position: | chr23:26310787-26310880 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 163-631 |
| Cow position: | chr23:22245464-22244986 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 57 |
| Conread position: | 164-372 |
| Cow position: | chr23:22242397-22242190 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 267-631 |
| Cow position: | chr23:26310910-26311260 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 408-606 |
| Cow position: | chr23:31558008-31557807 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 91, 196 |
| Conread position: | 408-631 |
| Cow position: | chr23:13097180-13097403 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 167, 86 |
| Conread position: | 411-655 |
| Cow position: | chr23:40912479-40912720 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 163, 121 |
| Conread position: | 420-644 |
| Cow position: | chr23:19636770-19636994 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 420-655 |
| Cow position: | chr23:19676800-19676565 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 213, 152 |
| Conread position: | 420-655 |
| Cow position: | chr23:41374892-41375131 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 121, 171 |
| Conread position: | 421-631 |
| Cow position: | chr23:37974950-37975154 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 421-655 |
| Cow position: | chr23:4828984-4829220 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 109, 154 |
| Conread position: | 423-655 |
| Cow position: | chr23:22874033-22874260 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 210, 62 |
| Conread position: | 424-655 |
| Cow position: | chr23:4548075-4547844 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 427-631 |
| Cow position: | chr23:10542797-10542594 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 148, 69 |
Show alignments to all cow chromosomes.