Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-643 |
| Cow position: | chr25:15965953-15966557 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 56-631 |
| Cow position: | chr25:31368552-31367967 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 76-642 |
| Cow position: | chr25:8541324-8541888 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 157-643 |
| Cow position: | chr25:479726-480216 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 108 |
| Conread position: | 157-673 |
| Cow position: | chr25:19017351-19017856 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 97 |
| Conread position: | 232-506 |
| Cow position: | chr25:150568-150299 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 236, 16 |
| Conread position: | 256-643 |
| Cow position: | chr25:4506969-4506595 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 147, 50 |
| Conread position: | 407-647 |
| Cow position: | chr25:18679225-18679464 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 158, 21 |
| Conread position: | 408-631 |
| Cow position: | chr25:22271937-22272163 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 133, 184 |
| Conread position: | 419-631 |
| Cow position: | chr25:6261779-6261574 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 419-631 |
| Cow position: | chr25:9597448-9597659 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 122, 155 |
| Conread position: | 419-631 |
| Cow position: | chr25:15960878-15961088 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 67, 78 |
| Conread position: | 419-655 |
| Cow position: | chr25:26099847-26100092 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 421-631 |
| Cow position: | chr25:31580218-31580426 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 115, 106 |
| Conread position: | 425-631 |
| Cow position: | chr25:15479822-15479615 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 425-631 |
| Cow position: | chr25:15632670-15632466 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 148 |
| Conread position: | 429-628 |
| Cow position: | chr25:5868750-5868546 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 177 |
| Conread position: | 429-631 |
| Cow position: | chr25:15914978-15914773 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 134, 0 |
Show alignments to all cow chromosomes.