Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 149-673 |
| Cow position: | chr27:3082474-3083001 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 157-452 |
| Cow position: | chr27:7174477-7174758 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 163-371 |
| Cow position: | chr27:28157370-28157576 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 163-631 |
| Cow position: | chr27:22123447-22123916 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 40 |
| Conread position: | 402-631 |
| Cow position: | chr27:22567563-22567789 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 408-627 |
| Cow position: | chr27:3912305-3912086 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 166, 182 |
| Conread position: | 408-655 |
| Cow position: | chr27:23877787-23877543 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 214, 54 |
| Conread position: | 411-655 |
| Cow position: | chr27:29996283-29996039 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 134, 116 |
| Conread position: | 419-600 |
| Cow position: | chr27:14181498-14181679 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 133, 154 |
| Conread position: | 419-631 |
| Cow position: | chr27:14152215-14152003 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 156 |
| Conread position: | 419-647 |
| Cow position: | chr27:14138994-14139226 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 123, 166 |
| Conread position: | 419-655 |
| Cow position: | chr27:29498965-29498729 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 121, 138 |
| Conread position: | 420-655 |
| Cow position: | chr27:14333505-14333739 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 421-631 |
| Cow position: | chr27:30988054-30988259 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 92 |
| Conread position: | 421-655 |
| Cow position: | chr27:7086496-7086264 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 426-654 |
| Cow position: | chr27:23052834-23052603 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 437-631 |
| Cow position: | chr27:23190672-23190477 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 442-654 |
| Cow position: | chr27:14680926-14681141 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 148 |
| Conread position: | 467-655 |
| Cow position: | chr27:26501844-26502032 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 85, 110 |
Show alignments to all cow chromosomes.