Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 55-643 |
| Cow position: | chr28:5341606-5341004 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 157-431 |
| Cow position: | chr28:74908-74645 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 157-431 |
| Cow position: | chr28:18147665-18147401 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 163-393 |
| Cow position: | chr28:34735915-34736144 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 163-523 |
| Cow position: | chr28:33914932-33914573 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 163-592 |
| Cow position: | chr28:3774997-3774584 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 297 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 408-631 |
| Cow position: | chr28:4547776-4547547 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 49, 93 |
| Conread position: | 408-631 |
| Cow position: | chr28:22969311-22969083 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 137, 72 |
| Conread position: | 419-655 |
| Cow position: | chr28:32649377-32649135 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 421-652 |
| Cow position: | chr28:513913-513688 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 425-615 |
| Cow position: | chr28:29984923-29984731 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 116, 178 |
| Conread position: | 437-631 |
| Cow position: | chr28:2370478-2370669 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 98 |
| Conread position: | 474-661 |
| Cow position: | chr28:34736196-34736392 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 488-652 |
| Cow position: | chr28:17529102-17529267 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 71 |
Show alignments to all cow chromosomes.