Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 157-634 |
| Cow position: | chr29:30723926-30723463 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 108 |
| Conread position: | 163-400 |
| Cow position: | chr29:30690946-30690717 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 163-628 |
| Cow position: | chr29:1821638-1822090 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 6, 94 |
| Conread position: | 167-631 |
| Cow position: | chr29:28330152-28329700 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 100 |
| Conread position: | 191-491 |
| Cow position: | chr29:29563736-29564037 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 35, 178 |
| Conread position: | 408-631 |
| Cow position: | chr29:6390029-6389806 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 127, 99 |
| Conread position: | 408-655 |
| Cow position: | chr29:8940601-8940850 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 166, 128 |
| Conread position: | 411-599 |
| Cow position: | chr29:32844519-32844707 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 163 |
| Conread position: | 419-606 |
| Cow position: | chr29:20706674-20706489 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 126, 66 |
| Conread position: | 419-631 |
| Cow position: | chr29:12897031-12897242 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 117, 166 |
| Conread position: | 421-630 |
| Cow position: | chr29:42198556-42198765 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 421-631 |
| Cow position: | chr29:28794925-28794713 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 120, 170 |
| Conread position: | 421-631 |
| Cow position: | chr29:28846999-28847209 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 421-647 |
| Cow position: | chr29:26597066-26596838 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 154 |
| Conread position: | 425-607 |
| Cow position: | chr29:15852675-15852491 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 178 |
| Conread position: | 454-653 |
| Cow position: | chr29:31218748-31218552 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 179, 122 |
| Conread position: | 457-642 |
| Cow position: | chr29:30714800-30714984 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 458-655 |
| Cow position: | chr29:18182910-18183109 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 82, 118 |
| Conread position: | 459-655 |
| Cow position: | chr29:5523441-5523244 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 86, 121 |
| Conread position: | 471-631 |
| Cow position: | chr29:44130950-44130789 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 113 |
Show alignments to all cow chromosomes.