Cow genome map


           Conread name:
           Ss1.1-rhyp01c_d6.5
        

               Conread position:
               59-810
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 164
               

               Conread position:
               156-810
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 55
               

               Conread position:
               157-376
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               157-393
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               157-431
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               5, 59
               

               Conread position:
               157-613
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               164-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               164-432
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               167-440
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               348-673
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 28
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               166, 88
               

               Conread position:
               408-654
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               167, 88
               

               Conread position:
               408-655
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               150, 112
               

               Conread position:
               411-631
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               107, 176
               

               Conread position:
               411-810
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 48
               

               Conread position:
               419-647
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               419-654
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 75
               

               Conread position:
               419-654
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               419-655
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               155, 171
               

               Conread position:
               420-631
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               110, 169
               

               Conread position:
               420-650
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               89, 154
               

               Conread position:
               420-654
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               154, 116
               

               Conread position:
               421-631
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               154, 169
               

               Conread position:
               421-655
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               421-655
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               421-675
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               154, 92
               

               Conread position:
               425-644
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               110, 153
               

               Conread position:
               425-647
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               426-653
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               207, 70
               

               Conread position:
               429-629
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 140
               

               Conread position:
               435-574
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               438-654
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               108, 140
               
Show alignments to all cow chromosomes.