Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 59-362 |
| Cow position: | chr6:23900376-23900061 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 156-379 |
| Cow position: | chr6:45340496-45340284 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 157-570 |
| Cow position: | chr6:44911578-44911983 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 163-643 |
| Cow position: | chr6:98362-97890 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 47 |
| Conread position: | 303-631 |
| Cow position: | chr6:19405998-19406323 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 313-678 |
| Cow position: | chr6:27959038-27959380 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 232, 53 |
| Conread position: | 408-631 |
| Cow position: | chr6:38939557-38939779 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 167, 86 |
| Conread position: | 408-655 |
| Cow position: | chr6:37884516-37884768 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 133, 196 |
| Conread position: | 411-631 |
| Cow position: | chr6:16604368-16604583 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 419-655 |
| Cow position: | chr6:60795121-60794882 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 122, 186 |
| Conread position: | 425-628 |
| Cow position: | chr6:49801243-49801448 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 166 |
| Conread position: | 425-631 |
| Cow position: | chr6:42803997-42804203 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 150, 69 |
| Conread position: | 425-638 |
| Cow position: | chr6:56909799-56910015 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 161 |
| Conread position: | 425-655 |
| Cow position: | chr6:54338128-54337898 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 426-631 |
| Cow position: | chr6:14883555-14883359 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 111, 71 |
| Conread position: | 426-631 |
| Cow position: | chr6:15068962-15068764 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 148, 10 |
| Conread position: | 426-654 |
| Cow position: | chr6:47225921-47226152 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 110, 123 |
| Conread position: | 428-655 |
| Cow position: | chr6:61436384-61436162 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 205, 107 |
| Conread position: | 430-627 |
| Cow position: | chr6:67782060-67782259 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 161 |
| Conread position: | 435-654 |
| Cow position: | chr6:50266104-50265882 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 141 |
| Conread position: | 442-810 |
| Cow position: | chr6:23900068-23899689 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 454-653 |
| Cow position: | chr6:47228961-47228760 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 139 |
| Conread position: | 459-627 |
| Cow position: | chr6:5984463-5984290 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.