Cow genome map


           Conread name:
           Ss1.1-rhyp01c_d6.5
        

               Conread position:
               23-631
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               53-258
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               55-643
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               56-631
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               59-814
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               65-661
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               66-365
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               157-396
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 93
               

               Conread position:
               157-631
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 59
               

               Conread position:
               157-814
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 212
               

               Conread position:
               159-610
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               164-349
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 95
               

               Conread position:
               354-661
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               167, 13
               

               Conread position:
               401-654
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               135, 44
               

               Conread position:
               408-631
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               408-632
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               167, 78
               

               Conread position:
               408-643
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               133, 73
               

               Conread position:
               419-655
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               122, 154
               

               Conread position:
               420-655
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               421-631
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               425-655
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               427-655
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               114, 21
               

               Conread position:
               429-631
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               145, 101
               

               Conread position:
               430-654
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               153, 15
               

               Conread position:
               438-654
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               137, 0
               
Show alignments to all cow chromosomes.