Cow genome map
| Conread name: | Ss1.1-rhyp01c_d6.5 |
| Conread position: | 56-642 |
| Cow position: | chr9:7447675-7448273 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 58-666 |
| Cow position: | chr9:33569014-33569618 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 59-810 |
| Cow position: | chr9:28535703-28536469 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 156-599 |
| Cow position: | chr9:22680613-22680192 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 301 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 183-643 |
| Cow position: | chr9:22726763-22726315 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 212, 58 |
| Conread position: | 290-629 |
| Cow position: | chr9:63755558-63755216 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 113, 87 |
| Conread position: | 408-579 |
| Cow position: | chr9:12638384-12638213 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 128, 165 |
| Conread position: | 408-654 |
| Cow position: | chr9:41027121-41026869 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 179 |
| Conread position: | 410-631 |
| Cow position: | chr9:27385902-27385679 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 131, 181 |
| Conread position: | 411-650 |
| Cow position: | chr9:44114479-44114714 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 163, 134 |
| Conread position: | 419-631 |
| Cow position: | chr9:16863590-16863803 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 117, 86 |
| Conread position: | 419-631 |
| Cow position: | chr9:58569329-58569536 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 419-655 |
| Cow position: | chr9:8627187-8627426 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 155, 171 |
| Conread position: | 420-630 |
| Cow position: | chr9:1383267-1383475 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 116, 153 |
| Conread position: | 420-648 |
| Cow position: | chr9:15993433-15993199 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 116, 185 |
| Conread position: | 420-655 |
| Cow position: | chr9:36712873-36712634 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 120, 171 |
| Conread position: | 420-676 |
| Cow position: | chr9:22440944-22441192 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 154, 25 |
| Conread position: | 421-652 |
| Cow position: | chr9:4968268-4968492 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 421-655 |
| Cow position: | chr9:3435919-3436151 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 152, 178 |
| Conread position: | 425-647 |
| Cow position: | chr9:1387975-1387751 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 110 |
| Conread position: | 427-652 |
| Cow position: | chr9:49421116-49420894 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 431-631 |
| Cow position: | chr9:16618955-16619153 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 142 |
| Conread position: | 437-655 |
| Cow position: | chr9:34047937-34047714 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 148 |
| Conread position: | 438-631 |
| Cow position: | chr9:7616059-7615864 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 153 |
| Conread position: | 449-653 |
| Cow position: | chr9:7009035-7008826 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 147 |
| Conread position: | 488-645 |
| Cow position: | chr9:30200004-30200162 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 53, 97 |
Show alignments to all cow chromosomes.