Cow genome map


           Conread name:
           Ss1.1-rhyp03c_j3.5
        

               Conread position:
               1-83
               

               Cow position:
               chr29:33360163-33360245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               80
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-299
               

               Cow position:
               chr29:33360456-33360627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-424
               

               Cow position:
               chr29:33360924-33361071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               134
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               22, 18
               

               Conread position:
               492-621
               

               Cow position:
               chr29:33361884-33362013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               118
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               804-948
               

               Cow position:
               chr29:33361640-33361794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 111
               

               Conread position:
               944-1062
               

               Cow position:
               chr29:33361884-33362002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.