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Cow genome map

           
Conread name:
           
Ss1.1-rhyp29c_b19.5
        

               
Conread position:
               
1-93
               

               
Cow position:
               
chr25:18012989-18013081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr25:27510627-27510536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-93
               

               
Cow position:
               
chr25:35612702-35612610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-101
               

               
Cow position:
               
chr25:13736774-13736673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr25:37594029-37594137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr25:31230822-31230707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr25:1762511-1762628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr25:7032601-7032721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr25:11540744-11540864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr25:41121640-41121760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:18487107-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr25:9595947-9596070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr25:14755786-14755661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr25:23325372-23325244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr25:22712066-22712200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr25:16316425-16316559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr25:14284137-14284001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr25:19570765-19570627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr25:5604608-5604466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr25:35077030-35076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr25:32823999-32823845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 122
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr25:2624275-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:18658536-18658701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr25:34000316-34000481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 122
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr25:36962361-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 134
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr25:8659472-8659303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr25:1951301-1951472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr25:21041452-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr25:598964-599149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:17553632-17553446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:32278398-32278212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr25:17992510-17992323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr25:14720116-14720302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr25:17191499-17191310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr25:11044274-11044472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr25:11054561-11054749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:6421420-6421219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
94, 196
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:17119554-17119352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:26791665-26791866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:36871490-36871692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr25:6118209-6117995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr25:13325233-13325445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 110
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr25:4860816-4860596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr25:30852405-30852620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 130
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:16409101-16408880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:18271892-18272114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:26187900-26187681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 209
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:27231970-27232188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr25:34156305-34156525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr25:7259179-7259405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr25:18240784-18241008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:29336122-29336358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:12174856-12174629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:17585302-17585051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr25:4488367-4488608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr25:26225406-26225162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:12176567-12176310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr25:5271218-5271475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr25:17994661-17994405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 191
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:12235122-12234873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:5756322-5756585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 213
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:13720909-13720653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 181
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:20496171-20496421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:30319818-30319563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 212
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr25:10367055-10366805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr25:24654538-24654280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 201
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:11956458-11956718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:21121216-21121481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:8576331-8576589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:37469409-37469672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
94, 132
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:8231251-8230972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 142
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:14274072-14274354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:16560959-16560682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:16738310-16738029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 83
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:18181749-18182027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr25:26911125-26910848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 220
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr25:17682144-17681863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
34, 205
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:41097562-41097267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
94, 145
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:4897728-4898013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
93, 218
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:12171096-12171375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
243, 127
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:18323722-18323434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 270
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:23945883-23945596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 114
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:29198961-29199244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 160
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:41356166-41355878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 209
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr25:33256001-33256284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:23410296-23410587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 210
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr25:26353131-26352832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 98
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:13840485-13840183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:16922163-16921862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:18448469-18448769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:20060397-20060097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 145
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:21209315-21209017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 252
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:40388822-40388527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr25:13429493-13429206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr25:18294684-18294384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 206
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr25:20403088-20402782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr25:24727154-24726850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr25:37638022-37637715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr25:11056509-11056810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:787904-788201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:2135995-2136292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:5539053-5539361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 209
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:6891896-6891588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
93, 212
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:7641817-7641516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:8482682-8482369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 209
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:8572239-8571927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 270
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:18885849-18885544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:20007752-20008073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
160, 107
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:20076130-20076431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:26087147-26087459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:27531634-27531336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:35446577-35446876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:35608095-35607784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr25:36765664-36765360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 157
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr25:33839019-33839318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 201
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:10011088-10010781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 110
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:10504705-10504399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:17598861-17598550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr25:41107392-41107701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:6740452-6740765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:10407787-10407466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 270
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:13787582-13787904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:20650898-20651221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:22412848-22412528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
93, 205
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr25:9396086-9396395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr25:18564124-18564440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
39, 206
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr25:2110714-2111019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr25:39386200-39385872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 263
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr25:4548091-4547756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:12157514-12157850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:13955755-13955417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:23407198-23406877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
251, 60
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:25510526-25510857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 267
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:26756104-26756440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 271
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:28274812-28274488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:33589772-33589437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:34013122-34012791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:34121457-34121121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:34343267-34342935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 219
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:34502050-34501721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 210
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:34659473-34659140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 169
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:35567255-35566921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 270
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:35589706-35590042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 296
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr25:26282661-26282990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
251, 98
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr25:1837874-1838209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 147
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr25:14225165-14224831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:12208122-12208470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 271
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:19339442-19339791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 214
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:20069358-20069697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 26
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:35554305-35554662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr25:27868442-27868778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr25:5341282-5341630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr25:23389641-23389303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 97
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr25:36392332-36391979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr25:15694617-15694964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr25:28863506-28863864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
93, 270
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr25:38972465-38972817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr25:14791387-14791752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 108
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr25:8120408-8120779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 128
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr25:11437171-11436811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 217
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr25:35339966-35340326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr25:7216453-7216829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 216
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:15319561-15319919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr25:4522186-4521828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
94, 136
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr25:32609783-32609409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 338
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr25:6470585-6470212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 122
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr25:14555304-14555688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
94, 338
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr25:22530918-22531310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 192
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr25:36124332-36124507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr25:38903263-38903067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr25:6226684-6226881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr25:38569962-38569719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
196, 135
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr25:11830262-11830010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr25:3992422-3992693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 268
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr25:25480000-25479701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 128
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr25:2046919-2046629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr25:9641976-9642288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
93, 134
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr25:27593934-27594237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr25:35347535-35347846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr25:36761748-36762043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
262, 59
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr25:27504540-27504212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr25:36779128-36779479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr25:6464396-6464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr25:23013846-23014068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
5-116
               

               
Cow position:
               
chr25:15452884-15452770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-122
               

               
Cow position:
               
chr25:4401747-4401627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-124
               

               
Cow position:
               
chr25:6988202-6988080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-137
               

               
Cow position:
               
chr25:20652337-20652202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
5-143
               

               
Cow position:
               
chr25:9045166-9045307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-147
               

               
Cow position:
               
chr25:15465661-15465806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr25:30601489-30601319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr25:21017837-21017664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 135
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr25:29559655-29559830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr25:9943806-9943624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr25:40429604-40429412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr25:33901742-33901548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr25:5032-5230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr25:38439796-38439997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr25:5611448-5611651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr25:10158382-10158583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr25:16033353-16033553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr25:18610684-18610879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr25:8098770-8098979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr25:32616409-32616202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr25:26896675-26896886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
5-218
               

               
Cow position:
               
chr25:24668988-24668772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr25:5154843-5154631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 74
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr25:16136791-16137015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr25:4857857-4857629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr25:11294428-11294670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr25:15937834-15937592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr25:11051018-11051256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr25:14618108-14617864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
5-250
               

               
Cow position:
               
chr25:16957522-16957279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr25:26869795-26870048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr25:19912906-19912654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 205
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr25:28327459-28327208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr25:36351379-36351632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr25:17659865-17660119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr25:12064002-12063748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 211
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr25:35585885-35585634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 146
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr25:36633347-36633096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
100, 43
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:7069161-7069419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:7717580-7717836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 187
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:9078454-9078704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 58
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:12753276-12753024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 46
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:17426893-17427151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:17993883-17993625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:18082396-18082145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:19586699-19586441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:23334647-23334905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-259
               

               
Cow position:
               
chr25:26940007-26940265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr25:15412661-15412919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr25:10012418-10012152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
5-272
               

               
Cow position:
               
chr25:3167544-3167273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr25:17659192-17659476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr25:12750528-12750240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 270
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr25:18490710-18491004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr25:21024567-21024284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
247, 62
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr25:36746811-36746508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 105
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr25:14954390-14954077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 167
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr25:26682200-26682527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 198
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr25:34672955-34672630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 5
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr25:13067347-13067016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr25:13960702-13961028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
247, 105
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:380346-380015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 205
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:3140941-3141273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:5537013-5536681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:8235605-8235273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:8655930-8656260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 236
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:9414763-9415095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
90, 271
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:11269563-11269236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 205
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:12943390-12943058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:13967029-13966697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:15618336-15618668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:18090557-18090890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:19138932-19138600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:19531020-19531352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:20771698-20771366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 266
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:22198222-22198554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:23601303-23600971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:26319381-26319713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:26618088-26618420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:27076698-27077030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:27143297-27142964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
65, 268
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:27146072-27146409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:28272950-28273282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:29383692-29383360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:29525227-29524895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:33990029-33989697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:34163921-34163595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
247, 83
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:34257623-34257955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:35602067-35602399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:35649473-35649805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:36127264-36126932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr25:36554640-36554967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
82, 232
               

               
Conread position:
               
5-339
               

               
Cow position:
               
chr25:7608953-7609296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr25:11097343-11097687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr25:16067897-16068238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr25:27017357-27017013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 267
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr25:2511073-2510725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 346
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr25:10896092-10895744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 292
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr25:6021605-6021950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr25:12318204-12317825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 329
               

               
Conread position:
               
5-453
               

               
Cow position:
               
chr25:3689050-3689494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 334
               

               
Conread position:
               
5-468
               

               
Cow position:
               
chr25:17808142-17807684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
90, 337
               

               
Conread position:
               
5-472
               

               
Cow position:
               
chr25:25873352-25872886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 334
               

               
Conread position:
               
5-547
               

               
Cow position:
               
chr25:15429039-15428494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-761
               

               
Cow position:
               
chr25:5461810-5462571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 720
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr25:14153817-14153621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr25:22277627-22277412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
6-248
               

               
Cow position:
               
chr25:32514206-32513961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr25:16688614-16688360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr25:18044864-18044566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 276
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr25:31733096-31732795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr25:19924160-19924488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr25:26923485-26923828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
7-118
               

               
Cow position:
               
chr25:2595626-2595740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
7-121
               

               
Cow position:
               
chr25:40906639-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
7-162
               

               
Cow position:
               
chr25:36757763-36757918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr25:15005843-15006044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr25:22730287-22730479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr25:2453956-2453748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr25:37687520-37687314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr25:12533457-12533217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 162
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr25:14823108-14822872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr25:30817214-30817462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
7-257
               

               
Cow position:
               
chr25:5847158-5846917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
202, 80
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr25:17658252-17658529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr25:30279571-30279289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
88, 234
               

               
Conread position:
               
7-306
               

               
Cow position:
               
chr25:22314838-22315134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 200
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chr25:41385469-41385166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 235
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chr25:394994-395291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 163
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chr25:7800773-7801077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 257
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chr25:12239499-12239209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
7-309
               

               
Cow position:
               
chr25:25827098-25827407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr25:16866875-16867168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr25:13569530-13569221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 205
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr25:21193306-21192985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 131
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr25:26849411-26849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
87, 264
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr25:26111919-26112218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
7-318
               

               
Cow position:
               
chr25:33959622-33959303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr25:26407837-26408172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr25:12204106-12204447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 207
               

               
Conread position:
               
7-346
               

               
Cow position:
               
chr25:26654545-26654888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
7-368
               

               
Cow position:
               
chr25:21950763-21951120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
7-373
               

               
Cow position:
               
chr25:11662178-11661810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
7-375
               

               
Cow position:
               
chr25:5514646-5515016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 130
               

               
Conread position:
               
7-375
               

               
Cow position:
               
chr25:16064535-16064894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
8-167
               

               
Cow position:
               
chr25:30268007-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
8-195
               

               
Cow position:
               
chr25:540640-540452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr25:16691143-16691395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
8-255
               

               
Cow position:
               
chr25:30621386-30621137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr25:32848685-32848420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
9-176
               

               
Cow position:
               
chr25:5555588-5555421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 152
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr25:33664257-33664035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 43
               

               
Conread position:
               
9-253
               

               
Cow position:
               
chr25:12840085-12840318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr25:18236735-18236406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
10-136
               

               
Cow position:
               
chr25:23913086-23912960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr25:14255202-14255373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
10-188
               

               
Cow position:
               
chr25:11315268-11315449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr25:26938616-26938423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr25:9349617-9349429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr25:29802099-29801887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr25:33263278-33263487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr25:33687258-33687036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr25:4188416-4188175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
10-286
               

               
Cow position:
               
chr25:12359846-12360126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 261
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr25:32191309-32191600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 147
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr25:1735670-1735375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr25:40957346-40957049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr25:12824389-12824069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 209
               

               
Conread position:
               
10-330
               

               
Cow position:
               
chr25:26881856-26882186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
84, 321
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr25:40321653-40321320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr25:24572712-24573045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 197
               

               
Conread position:
               
10-373
               

               
Cow position:
               
chr25:27621722-27622091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr25:6683420-6683026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
11-185
               

               
Cow position:
               
chr25:20790052-20789884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chr25:3145487-3145783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chr25:5792161-5791861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 44
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chr25:20394848-20395130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr25:17037097-17037423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr25:18155237-18155562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr25:9055846-9056175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 88
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chr25:16796531-16796352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr25:20234681-20234496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
12-200
               

               
Cow position:
               
chr25:13553555-13553745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr25:16029596-16029401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr25:1793649-1793837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
12-203
               

               
Cow position:
               
chr25:4119311-4119506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr25:4485735-4485931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr25:30412297-30412062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
12-242
               

               
Cow position:
               
chr25:5644251-5644482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
12-251
               

               
Cow position:
               
chr25:36499397-36499633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
197, 138
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr25:30816468-30816716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr25:24653073-24653314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
12-260
               

               
Cow position:
               
chr25:14761796-14761546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 220
               

               
Conread position:
               
12-279
               

               
Cow position:
               
chr25:12459641-12459917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr25:38910178-38910503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 260
               

               
Conread position:
               
13-176
               

               
Cow position:
               
chr25:13122585-13122749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr25:21562305-21562123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr25:22549959-22549783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
13-203
               

               
Cow position:
               
chr25:20248950-20249136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr25:13412072-13412270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr25:14960057-14959862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
13-242
               

               
Cow position:
               
chr25:10375224-10374991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
13-253
               

               
Cow position:
               
chr25:13132410-13132649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
13-255
               

               
Cow position:
               
chr25:4049678-4049915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
13-256
               

               
Cow position:
               
chr25:9625453-9625698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
13-257
               

               
Cow position:
               
chr25:1096220-1096464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 192
               

               
Conread position:
               
13-257
               

               
Cow position:
               
chr25:16430379-16430147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 117
               

               
Conread position:
               
13-279
               

               
Cow position:
               
chr25:13446277-13446007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 219
               

               
Conread position:
               
13-280
               

               
Cow position:
               
chr25:6948416-6948144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
13-284
               

               
Cow position:
               
chr25:36119845-36120114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
13-287
               

               
Cow position:
               
chr25:32899163-32898884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr25:7386404-7386688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
239, 55
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr25:11585156-11585455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
13-309
               

               
Cow position:
               
chr25:26238512-26238809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 202
               

               
Conread position:
               
14-192
               

               
Cow position:
               
chr25:2414481-2414655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
14-211
               

               
Cow position:
               
chr25:33025436-33025240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
14-219
               

               
Cow position:
               
chr25:9532294-9532503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
14-254
               

               
Cow position:
               
chr25:23829465-23829236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr25:9842649-9842898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
14-280
               

               
Cow position:
               
chr25:10698798-10699068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
80, 256
               

               
Conread position:
               
14-302
               

               
Cow position:
               
chr25:2498908-2499195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
14-309
               

               
Cow position:
               
chr25:21191134-21191425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 238
               

               
Conread position:
               
14-327
               

               
Cow position:
               
chr25:11666311-11666606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
242, 74
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr25:25754351-25753999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr25:27424096-27423871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 72
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr25:10137751-10138012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
16-163
               

               
Cow position:
               
chr25:10013739-10013589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr25:15668166-15667984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
16-198
               

               
Cow position:
               
chr25:25866581-25866760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr25:23351042-23351328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 164
               

               
Conread position:
               
16-309
               

               
Cow position:
               
chr25:26757077-26757375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
17-150
               

               
Cow position:
               
chr25:35892108-35892243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr25:21069089-21068874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
18-219
               

               
Cow position:
               
chr25:7732611-7732815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
20-200
               

               
Cow position:
               
chr25:31064821-31064994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
21-124
               

               
Cow position:
               
chr25:16044933-16044827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
21-173
               

               
Cow position:
               
chr25:12807853-12807697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
21-286
               

               
Cow position:
               
chr25:26523628-26523880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 162
               

               
Conread position:
               
22-250
               

               
Cow position:
               
chr25:20434207-20434432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr25:35655214-35655442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
22-309
               

               
Cow position:
               
chr25:41351550-41351265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
22-335
               

               
Cow position:
               
chr25:10643656-10643342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
22-340
               

               
Cow position:
               
chr25:38981759-38982074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
23-351
               

               
Cow position:
               
chr25:13333076-13333410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
24-257
               

               
Cow position:
               
chr25:31586694-31586927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
24-276
               

               
Cow position:
               
chr25:15273344-15273594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
25-177
               

               
Cow position:
               
chr25:16007219-16007364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
25-203
               

               
Cow position:
               
chr25:8485877-8485699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
26-330
               

               
Cow position:
               
chr25:7445810-7446113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
27-144
               

               
Cow position:
               
chr25:6961520-6961402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
28-309
               

               
Cow position:
               
chr25:21245948-21245665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
29-309
               

               
Cow position:
               
chr25:17354038-17354317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 175
               

               
Conread position:
               
30-203
               

               
Cow position:
               
chr25:3969056-3969231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
65, 158
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr25:2126129-2126431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
31-219
               

               
Cow position:
               
chr25:10212158-10212348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
31-300
               

               
Cow position:
               
chr25:20625268-20624999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr25:13062518-13062824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr25:23738792-23738487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 239
               

               
Conread position:
               
33-222
               

               
Cow position:
               
chr25:19585676-19585485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
34-195
               

               
Cow position:
               
chr25:9634587-9634747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr25:10287795-10287621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
35-319
               

               
Cow position:
               
chr25:41392999-41392708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 234
               

               
Conread position:
               
35-360
               

               
Cow position:
               
chr25:36037125-36036793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
36-185
               

               
Cow position:
               
chr25:33735288-33735440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
36-330
               

               
Cow position:
               
chr25:17538747-17538446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 251
               

               
Conread position:
               
37-167
               

               
Cow position:
               
chr25:6803231-6803364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
37-218
               

               
Cow position:
               
chr25:11920632-11920449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 174
               

               
Conread position:
               
38-330
               

               
Cow position:
               
chr25:10637838-10637539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
43-302
               

               
Cow position:
               
chr25:16039166-16038905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
43-317
               

               
Cow position:
               
chr25:12359223-12359498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
43-333
               

               
Cow position:
               
chr25:9961493-9961205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
43-342
               

               
Cow position:
               
chr25:3927717-3928021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
45-340
               

               
Cow position:
               
chr25:6424906-6424615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
219, 43
               

               
Conread position:
               
46-309
               

               
Cow position:
               
chr25:9847462-9847727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
46-330
               

               
Cow position:
               
chr25:17418859-17419150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
46-347
               

               
Cow position:
               
chr25:6886292-6885995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
47-271
               

               
Cow position:
               
chr25:15714557-15714784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 209
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr25:17975690-17975438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
48, 163
               

               
Conread position:
               
49-259
               

               
Cow position:
               
chr25:18073231-18073445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
49-280
               

               
Cow position:
               
chr25:16231445-16231213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
203, 219
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr25:12097523-12097839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
51-344
               

               
Cow position:
               
chr25:9023326-9023609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
51-385
               

               
Cow position:
               
chr25:29352243-29351909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
52-222
               

               
Cow position:
               
chr25:22346332-22346498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
52-256
               

               
Cow position:
               
chr25:41044499-41044702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
52-286
               

               
Cow position:
               
chr25:27821092-27821331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 220
               

               
Conread position:
               
52-309
               

               
Cow position:
               
chr25:9743907-9744169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
52-344
               

               
Cow position:
               
chr25:7762929-7763228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 220
               

               
Conread position:
               
54-303
               

               
Cow position:
               
chr25:25051700-25051448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr25:15368361-15368579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 167
               

               
Conread position:
               
55-286
               

               
Cow position:
               
chr25:13708702-13708929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
40, 135
               

               
Conread position:
               
55-346
               

               
Cow position:
               
chr25:23053242-23053538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
58-254
               

               
Cow position:
               
chr25:21961318-21961122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
58-300
               

               
Cow position:
               
chr25:18968960-18969205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 220
               

               
Conread position:
               
58-309
               

               
Cow position:
               
chr25:12817061-12817314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
58-310
               

               
Cow position:
               
chr25:20460819-20461066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
61-309
               

               
Cow position:
               
chr25:8347200-8347447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
61-320
               

               
Cow position:
               
chr25:29561655-29561914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 149
               

               
Conread position:
               
64-256
               

               
Cow position:
               
chr25:25961656-25961850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
65-317
               

               
Cow position:
               
chr25:16242274-16242021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
66-385
               

               
Cow position:
               
chr25:14351994-14352313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 276
               

               
Conread position:
               
68-367
               

               
Cow position:
               
chr25:16319428-16319146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
70-286
               

               
Cow position:
               
chr25:25948695-25948483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 122
               

               
Conread position:
               
74-309
               

               
Cow position:
               
chr25:6474396-6474158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
76-226
               

               
Cow position:
               
chr25:14117815-14117967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr25:12261176-12260937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
171, 70
               

               
Conread position:
               
88-207
               

               
Cow position:
               
chr25:23920132-23920012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr25:10330673-10330500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
88-278
               

               
Cow position:
               
chr25:25783359-25783548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
88-298
               

               
Cow position:
               
chr25:20023678-20023462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 168
               

               
Conread position:
               
88-301
               

               
Cow position:
               
chr25:20348579-20348792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
168, 119
               

               
Conread position:
               
88-309
               

               
Cow position:
               
chr25:12195604-12195389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
173, 106
               

               
Conread position:
               
88-365
               

               
Cow position:
               
chr25:9931795-9932076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
88-368
               

               
Cow position:
               
chr25:22297296-22297018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
219, 106
               

               
Conread position:
               
88-385
               

               
Cow position:
               
chr25:34618383-34618089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
164, 181
               

               
Conread position:
               
89-341
               

               
Cow position:
               
chr25:10366030-10365779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
93-318
               

               
Cow position:
               
chr25:36081601-36081827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
175, 20
               

               
Conread position:
               
94-279
               

               
Cow position:
               
chr25:14266775-14266595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
166, 36
               

               
Conread position:
               
94-344
               

               
Cow position:
               
chr25:14512843-14513088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
209, 42
               

               
Conread position:
               
94-346
               

               
Cow position:
               
chr25:30035279-30035525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 27
               

               
Conread position:
               
94-346
               

               
Cow position:
               
chr25:36535705-36535456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
95-345
               

               
Cow position:
               
chr25:9596354-9596605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 112
               

               
Conread position:
               
97-286
               

               
Cow position:
               
chr25:26700770-26700952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
97-308
               

               
Cow position:
               
chr25:23917572-23917781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
97-309
               

               
Cow position:
               
chr25:6003261-6003053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
97-309
               

               
Cow position:
               
chr25:14196585-14196798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
97-309
               

               
Cow position:
               
chr25:17712264-17712475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
167, 113
               

               
Conread position:
               
97-309
               

               
Cow position:
               
chr25:21266736-21266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr25:22203960-22203719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 209
               

               
Conread position:
               
98-211
               

               
Cow position:
               
chr25:8961194-8961307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-257
               

               
Cow position:
               
chr25:18452855-18453017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
98-286
               

               
Cow position:
               
chr25:18935144-18934957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
98-302
               

               
Cow position:
               
chr25:24168167-24167970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 45
               

               
Conread position:
               
98-309
               

               
Cow position:
               
chr25:5837235-5837027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
98-309
               

               
Cow position:
               
chr25:8512360-8512152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
98-309
               

               
Cow position:
               
chr25:38135478-38135685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
98-344
               

               
Cow position:
               
chr25:14833922-14833685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
163, 41
               

               
Conread position:
               
98-349
               

               
Cow position:
               
chr25:24406009-24405756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
98-369
               

               
Cow position:
               
chr25:11131316-11131580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
99-272
               

               
Cow position:
               
chr25:37594146-37594316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 126
               

               
Conread position:
               
100-301
               

               
Cow position:
               
chr25:21895150-21894956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
152, 28
               

               
Conread position:
               
100-318
               

               
Cow position:
               
chr25:13642583-13642361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
90, 111
               

               
Conread position:
               
100-333
               

               
Cow position:
               
chr25:35625438-35625218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
164, 28
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr25:28188215-28187969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
100-350
               

               
Cow position:
               
chr25:35344771-35345008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
209, 110
               

               
Conread position:
               
101-283
               

               
Cow position:
               
chr25:24452434-24452255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
102-311
               

               
Cow position:
               
chr25:18988112-18988326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
102-312
               

               
Cow position:
               
chr25:33691289-33691500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
103-318
               

               
Cow position:
               
chr25:18075405-18075624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr25:7306035-7306239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
161, 149
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr25:33550244-33550490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
206, 41
               

               
Conread position:
               
106-282
               

               
Cow position:
               
chr25:13566584-13566762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
106-309
               

               
Cow position:
               
chr25:12778795-12778596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 148
               

               
Conread position:
               
106-318
               

               
Cow position:
               
chr25:17566326-17566538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
124, 101
               

               
Conread position:
               
106-350
               

               
Cow position:
               
chr25:19679081-19679326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
157, 146
               

               
Conread position:
               
108-351
               

               
Cow position:
               
chr25:8918537-8918298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 163
               

               
Conread position:
               
109-309
               

               
Cow position:
               
chr25:7581685-7581486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr25:16001779-16001550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
110-300
               

               
Cow position:
               
chr25:15254588-15254404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
113-318
               

               
Cow position:
               
chr25:2194693-2194893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
191, 22
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr25:36026753-36026985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 94
               

               
Conread position:
               
114-261
               

               
Cow position:
               
chr25:10156338-10156479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
114-333
               

               
Cow position:
               
chr25:4002543-4002766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
123, 103
               

               
Conread position:
               
114-350
               

               
Cow position:
               
chr25:19129599-19129836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
116-255
               

               
Cow position:
               
chr25:32176472-32176332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
128-318
               

               
Cow position:
               
chr25:21289101-21289297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
128-352
               

               
Cow position:
               
chr25:13380855-13380630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 140
               

               
Conread position:
               
130-351
               

               
Cow position:
               
chr25:7329307-7329527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 122
               

               
Conread position:
               
130-369
               

               
Cow position:
               
chr25:15377096-15377323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
131-318
               

               
Cow position:
               
chr25:61421-61609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
135-311
               

               
Cow position:
               
chr25:6256170-6255996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
141-349
               

               
Cow position:
               
chr25:26090041-26089836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
161-341
               

               
Cow position:
               
chr25:16714480-16714296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 48
               
Show alignments to all cow chromosomes.