Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rhyp29c_b19.5
        

               Conread position:
               1-93
               

               Cow position:
               chr5:68871818-68871910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-108
               

               Cow position:
               chr5:6670497-6670387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:3966995-3967116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               93, 87
               

               Conread position:
               1-118
               

               Cow position:
               chr5:5812425-5812308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:9024622-9024504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:10065758-10065638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:24102387-24102507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:32754753-32754633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:47696992-47696875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:48926034-48925914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-118
               

               Cow position:
               chr5:49428632-49428511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-121
               

               Cow position:
               chr5:15425904-15426024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               1-121
               

               Cow position:
               chr5:48026951-48027074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-124
               

               Cow position:
               chr5:15722636-15722510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr5:5848800-5848675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-130
               

               Cow position:
               chr5:12105460-12105591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               1-134
               

               Cow position:
               chr5:5081141-5081277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr5:10417664-10417525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr5:54951434-54951295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-137
               

               Cow position:
               chr5:58795982-58795843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-138
               

               Cow position:
               chr5:61054972-61054831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:5785780-5785637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-141
               

               Cow position:
               chr5:34482032-34481889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-142
               

               Cow position:
               chr5:30978044-30978188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-144
               

               Cow position:
               chr5:28456854-28456712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-144
               

               Cow position:
               chr5:28460156-28460014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-144
               

               Cow position:
               chr5:44447711-44447565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-147
               

               Cow position:
               chr5:71846079-71846228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-152
               

               Cow position:
               chr5:56137235-56137385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-157
               

               Cow position:
               chr5:9385328-9385172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               93, 87
               

               Conread position:
               1-160
               

               Cow position:
               chr5:60215453-60215612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-161
               

               Cow position:
               chr5:12161245-12161083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-162
               

               Cow position:
               chr5:29843969-29844130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1-162
               

               Cow position:
               chr5:70270620-70270785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               1-167
               

               Cow position:
               chr5:7921723-7921551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr5:39242689-39242512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr5:41976184-41976017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               95, 42
               

               Conread position:
               1-168
               

               Cow position:
               chr5:59114565-59114736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr5:41519891-41519725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-170
               

               Cow position:
               chr5:31020455-31020286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               1-173
               

               Cow position:
               chr5:7808180-7808009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr5:19780348-19780176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr5:23912548-23912724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-174
               

               Cow position:
               chr5:31119513-31119337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-175
               

               Cow position:
               chr5:408125-408301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 137
               

               Conread position:
               1-175
               

               Cow position:
               chr5:32809344-32809165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               94, 133
               

               Conread position:
               1-176
               

               Cow position:
               chr5:40423303-40423479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr5:40397000-40397178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 63
               

               Conread position:
               1-179
               

               Cow position:
               chr5:42673753-42673929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               169, 146
               

               Conread position:
               1-182
               

               Cow position:
               chr5:1054683-1054500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               1-185
               

               Cow position:
               chr5:66972061-66972248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               153
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr5:30950486-30950293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-192
               

               Cow position:
               chr5:40058237-40058427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               1-194
               

               Cow position:
               chr5:75756277-75756479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               1-196
               

               Cow position:
               chr5:63607903-63607705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 111
               

               Conread position:
               1-196
               

               Cow position:
               chr5:66366192-66366387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 128
               

               Conread position:
               1-197
               

               Cow position:
               chr5:59779501-59779302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               9, 132
               

               Conread position:
               1-197
               

               Cow position:
               chr5:59782102-59781903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               9, 132
               

               Conread position:
               1-198
               

               Cow position:
               chr5:34192613-34192804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr5:765382-765583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               1-200
               

               Cow position:
               chr5:12315976-12316175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr5:34888195-34888000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr5:73070106-73070308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-200
               

               Cow position:
               chr5:75259487-75259689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:4071531-4071734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 192
               

               Conread position:
               1-203
               

               Cow position:
               chr5:5814416-5814211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:10853155-10852950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:30583010-30583215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr5:39284620-39284414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               87, 23
               

               Conread position:
               1-203
               

               Cow position:
               chr5:66859647-66859442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr5:46611425-46611215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               130, 93
               

               Conread position:
               1-211
               

               Cow position:
               chr5:12557743-12557536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               92, 56
               

               Conread position:
               1-219
               

               Cow position:
               chr5:12718913-12719133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               1-219
               

               Cow position:
               chr5:55654394-55654615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr5:20959015-20959230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr5:53005576-53005352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr5:31730845-31731076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr5:36724060-36723836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               93, 209
               

               Conread position:
               1-227
               

               Cow position:
               chr5:46130120-46129892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               1-228
               

               Cow position:
               chr5:7385805-7386035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               1-228
               

               Cow position:
               chr5:37255697-37255467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr5:54126742-54126964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               1-229
               

               Cow position:
               chr5:48765292-48765521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               1-230
               

               Cow position:
               chr5:54337582-54337814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-236
               

               Cow position:
               chr5:64122386-64122143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               1-245
               

               Cow position:
               chr5:8986268-8986023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               1-248
               

               Cow position:
               chr5:1394767-1394520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               87, 209
               

               Conread position:
               1-248
               

               Cow position:
               chr5:47589911-47589662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               1-250
               

               Cow position:
               chr5:52289440-52289684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               95, 51
               

               Conread position:
               1-253
               

               Cow position:
               chr5:4166329-4166572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               93, 195
               

               Conread position:
               1-254
               

               Cow position:
               chr5:21937747-21937498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 133
               

               Conread position:
               1-254
               

               Cow position:
               chr5:47055265-47055008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-255
               

               Cow position:
               chr5:3058330-3058590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               91, 23
               

               Conread position:
               1-255
               

               Cow position:
               chr5:44369554-44369811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               1-256
               

               Cow position:
               chr5:4630785-4631036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               63, 132
               

               Conread position:
               1-256
               

               Cow position:
               chr5:18276150-18276391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-256
               

               Cow position:
               chr5:27690400-27690144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 13
               

               Conread position:
               1-256
               

               Cow position:
               chr5:46023518-46023266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               1-256
               

               Cow position:
               chr5:46080596-46080344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               1-257
               

               Cow position:
               chr5:18404420-18404162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-257
               

               Cow position:
               chr5:41604269-41604529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               106, 202
               

               Conread position:
               1-257
               

               Cow position:
               chr5:41936135-41935883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-257
               

               Cow position:
               chr5:50573416-50573671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 218
               

               Conread position:
               1-257
               

               Cow position:
               chr5:54714083-54713825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               93, 216
               

               Conread position:
               1-257
               

               Cow position:
               chr5:57365408-57365161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-257
               

               Cow position:
               chr5:67654971-67655235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               50, 149
               

               Conread position:
               1-258
               

               Cow position:
               chr5:51315189-51314928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               87, 125
               

               Conread position:
               1-259
               

               Cow position:
               chr5:3789907-3790169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-259
               

               Cow position:
               chr5:13807078-13806822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               84, 191
               

               Conread position:
               1-259
               

               Cow position:
               chr5:23881649-23881385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1-260
               

               Cow position:
               chr5:49220813-49220551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-264
               

               Cow position:
               chr5:694240-694505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 136
               

               Conread position:
               1-264
               

               Cow position:
               chr5:48535467-48535731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               1-266
               

               Cow position:
               chr5:27010953-27011220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 154
               

               Conread position:
               1-266
               

               Cow position:
               chr5:67212040-67212307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 0
               

               Conread position:
               1-269
               

               Cow position:
               chr5:48799718-48799990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-270
               

               Cow position:
               chr5:12672363-12672103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               94, 110
               

               Conread position:
               1-272
               

               Cow position:
               chr5:70035058-70035328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1-276
               

               Cow position:
               chr5:6528338-6528616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               1-276
               

               Cow position:
               chr5:14557567-14557300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               93, 123
               

               Conread position:
               1-277
               

               Cow position:
               chr5:31053080-31053360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               93, 171
               

               Conread position:
               1-280
               

               Cow position:
               chr5:7498301-7498018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 270
               

               Conread position:
               1-280
               

               Cow position:
               chr5:12640570-12640299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-280
               

               Cow position:
               chr5:30176521-30176239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               94, 218
               

               Conread position:
               1-282
               

               Cow position:
               chr5:31097146-31096858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-284
               

               Cow position:
               chr5:1105201-1104923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 90
               

               Conread position:
               1-284
               

               Cow position:
               chr5:22565297-22565583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               1-284
               

               Cow position:
               chr5:41129413-41129701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               89, 214
               

               Conread position:
               1-285
               

               Cow position:
               chr5:3500448-3500151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               94, 279
               

               Conread position:
               1-285
               

               Cow position:
               chr5:9099776-9099489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-285
               

               Cow position:
               chr5:14635895-14635611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               93, 114
               

               Conread position:
               1-285
               

               Cow position:
               chr5:17386935-17386646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-285
               

               Cow position:
               chr5:25926753-25926461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               69, 274
               

               Conread position:
               1-285
               

               Cow position:
               chr5:26101403-26101685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               94, 204
               

               Conread position:
               1-285
               

               Cow position:
               chr5:45999362-45999078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               1-285
               

               Cow position:
               chr5:48718483-48718765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-285
               

               Cow position:
               chr5:51746901-51747186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               1-285
               

               Cow position:
               chr5:62678317-62678604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1-286
               

               Cow position:
               chr5:15363552-15363837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 263
               

               Conread position:
               1-286
               

               Cow position:
               chr5:35988975-35989263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 130
               

               Conread position:
               1-286
               

               Cow position:
               chr5:60897185-60896897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               94, 9
               

               Conread position:
               1-290
               

               Cow position:
               chr5:73222360-73222637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               265, 68
               

               Conread position:
               1-298
               

               Cow position:
               chr5:64844458-64844167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-299
               

               Cow position:
               chr5:19470524-19470227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-300
               

               Cow position:
               chr5:12134265-12134568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 267
               

               Conread position:
               1-300
               

               Cow position:
               chr5:16085137-16084837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               94, 75
               

               Conread position:
               1-300
               

               Cow position:
               chr5:19813561-19813258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               106, 159
               

               Conread position:
               1-300
               

               Cow position:
               chr5:21189901-21190204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               93, 206
               

               Conread position:
               1-300
               

               Cow position:
               chr5:22737764-22738065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 174
               

               Conread position:
               1-300
               

               Cow position:
               chr5:29504764-29505065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 137
               

               Conread position:
               1-300
               

               Cow position:
               chr5:41410761-41410457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-300
               

               Cow position:
               chr5:47889056-47888752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-300
               

               Cow position:
               chr5:59269405-59269707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               94, 6
               

               Conread position:
               1-301
               

               Cow position:
               chr5:11631301-11630991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-301
               

               Cow position:
               chr5:13691916-13691610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               1-301
               

               Cow position:
               chr5:56442940-56443244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 61
               

               Conread position:
               1-301
               

               Cow position:
               chr5:66338745-66339037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 139
               

               Conread position:
               1-302
               

               Cow position:
               chr5:279496-279191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               1-302
               

               Cow position:
               chr5:12146352-12146657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-302
               

               Cow position:
               chr5:29903863-29903559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 167
               

               Conread position:
               1-302
               

               Cow position:
               chr5:30302557-30302852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               1-302
               

               Cow position:
               chr5:46780194-46780497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 42
               

               Conread position:
               1-306
               

               Cow position:
               chr5:50599725-50600019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-307
               

               Cow position:
               chr5:21617124-21617421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               1-307
               

               Cow position:
               chr5:31145120-31144824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               1-308
               

               Cow position:
               chr5:18573829-18574138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 211
               

               Conread position:
               1-308
               

               Cow position:
               chr5:54405235-54404926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 105
               

               Conread position:
               1-309
               

               Cow position:
               chr5:14314182-14314491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               1-309
               

               Cow position:
               chr5:21040315-21040007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               22, 188
               

               Conread position:
               1-309
               

               Cow position:
               chr5:23354397-23354703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 206
               

               Conread position:
               1-309
               

               Cow position:
               chr5:24348780-24349074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 49
               

               Conread position:
               1-309
               

               Cow position:
               chr5:26378005-26377703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               1-309
               

               Cow position:
               chr5:27154683-27154989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               96, 78
               

               Conread position:
               1-309
               

               Cow position:
               chr5:28927938-28927623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 213
               

               Conread position:
               1-309
               

               Cow position:
               chr5:29969292-29969604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 270
               

               Conread position:
               1-309
               

               Cow position:
               chr5:30276354-30276663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               93, 127
               

               Conread position:
               1-309
               

               Cow position:
               chr5:33792288-33792587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 127
               

               Conread position:
               1-309
               

               Cow position:
               chr5:34288809-34288505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 180
               

               Conread position:
               1-309
               

               Cow position:
               chr5:34442134-34441825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 202
               

               Conread position:
               1-309
               

               Cow position:
               chr5:35145009-35145315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 214
               

               Conread position:
               1-309
               

               Cow position:
               chr5:35826260-35826569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 49
               

               Conread position:
               1-309
               

               Cow position:
               chr5:36679787-36679469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               87, 213
               

               Conread position:
               1-309
               

               Cow position:
               chr5:37586383-37586072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               93, 270
               

               Conread position:
               1-309
               

               Cow position:
               chr5:37736344-37736656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               93, 213
               

               Conread position:
               1-309
               

               Cow position:
               chr5:41531431-41531116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-309
               

               Cow position:
               chr5:41546231-41545928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               1-309
               

               Cow position:
               chr5:43984766-43985071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               98, 204
               

               Conread position:
               1-309
               

               Cow position:
               chr5:44054376-44054069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 239
               

               Conread position:
               1-309
               

               Cow position:
               chr5:46104281-46103974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               91, 216
               

               Conread position:
               1-309
               

               Cow position:
               chr5:46122669-46122384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               257, 42
               

               Conread position:
               1-309
               

               Cow position:
               chr5:46510209-46509901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 227
               

               Conread position:
               1-309
               

               Cow position:
               chr5:47601470-47601785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 133
               

               Conread position:
               1-309
               

               Cow position:
               chr5:48972250-48972563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 221
               

               Conread position:
               1-309
               

               Cow position:
               chr5:49558821-49559135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 217
               

               Conread position:
               1-309
               

               Cow position:
               chr5:55176551-55176856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 110
               

               Conread position:
               1-309
               

               Cow position:
               chr5:57935454-57935143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 267
               

               Conread position:
               1-309
               

               Cow position:
               chr5:58460746-58460429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-309
               

               Cow position:
               chr5:66815922-66815604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 191
               

               Conread position:
               1-309
               

               Cow position:
               chr5:67462633-67462934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 141
               

               Conread position:
               1-310
               

               Cow position:
               chr5:9894465-9894163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               1-310
               

               Cow position:
               chr5:14630249-14629937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               92, 146
               

               Conread position:
               1-310
               

               Cow position:
               chr5:31687057-31687368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 223
               

               Conread position:
               1-310
               

               Cow position:
               chr5:64321413-64321719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               1-311
               

               Cow position:
               chr5:9867837-9868148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               93, 269
               

               Conread position:
               1-311
               

               Cow position:
               chr5:46653564-46653872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               1-311
               

               Cow position:
               chr5:51309626-51309939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               93, 268
               

               Conread position:
               1-311
               

               Cow position:
               chr5:56467364-56467667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               1-312
               

               Cow position:
               chr5:27007554-27007869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               1-313
               

               Cow position:
               chr5:72314798-72314479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 270
               

               Conread position:
               1-314
               

               Cow position:
               chr5:26790785-26790481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 126
               

               Conread position:
               1-314
               

               Cow position:
               chr5:32378531-32378827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               308, 151
               

               Conread position:
               1-316
               

               Cow position:
               chr5:54869076-54869395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               85, 189
               

               Conread position:
               1-317
               

               Cow position:
               chr5:18287326-18287647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               1-317
               

               Cow position:
               chr5:33180574-33180885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               94, 40
               

               Conread position:
               1-317
               

               Cow position:
               chr5:37377527-37377840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               97, 140
               

               Conread position:
               1-317
               

               Cow position:
               chr5:43437257-43436935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               1-317
               

               Cow position:
               chr5:46235147-46234827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 240
               

               Conread position:
               1-317
               

               Cow position:
               chr5:51151704-51151381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 133
               

               Conread position:
               1-317
               

               Cow position:
               chr5:66064787-66065107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 217
               

               Conread position:
               1-318
               

               Cow position:
               chr5:360285-359964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 47
               

               Conread position:
               1-318
               

               Cow position:
               chr5:13908945-13908638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               251, 48
               

               Conread position:
               1-318
               

               Cow position:
               chr5:16184751-16185065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 198
               

               Conread position:
               1-318
               

               Cow position:
               chr5:27015352-27015659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               1-318
               

               Cow position:
               chr5:58004904-58005229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               1-318
               

               Cow position:
               chr5:61839847-61840170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 146
               

               Conread position:
               1-318
               

               Cow position:
               chr5:65776733-65776404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 273
               

               Conread position:
               1-318
               

               Cow position:
               chr5:65887351-65887028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               1-321
               

               Cow position:
               chr5:75829070-75828759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               194, 45
               

               Conread position:
               1-323
               

               Cow position:
               chr5:23397546-23397867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               1-326
               

               Cow position:
               chr5:20410979-20410646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 270
               

               Conread position:
               1-326
               

               Cow position:
               chr5:55631748-55632081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 270
               

               Conread position:
               1-327
               

               Cow position:
               chr5:31469915-31469595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               1-327
               

               Cow position:
               chr5:38818832-38818510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1-328
               

               Cow position:
               chr5:5937983-5938313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 217
               

               Conread position:
               1-328
               

               Cow position:
               chr5:7397205-7397534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 212
               

               Conread position:
               1-328
               

               Cow position:
               chr5:11639179-11639511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               87, 249
               

               Conread position:
               1-328
               

               Cow position:
               chr5:21524824-21525160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 46
               

               Conread position:
               1-328
               

               Cow position:
               chr5:27179318-27179648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               169, 63
               

               Conread position:
               1-328
               

               Cow position:
               chr5:28330670-28330344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 201
               

               Conread position:
               1-328
               

               Cow position:
               chr5:38853018-38853348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 309
               

               Conread position:
               1-328
               

               Cow position:
               chr5:48828806-48829146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 316
               

               Conread position:
               1-328
               

               Cow position:
               chr5:57335680-57335346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               87, 296
               

               Conread position:
               1-329
               

               Cow position:
               chr5:55428215-55428551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 272
               

               Conread position:
               1-329
               

               Cow position:
               chr5:58516445-58516110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-329
               

               Cow position:
               chr5:58770190-58769856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               1-330
               

               Cow position:
               chr5:1338240-1337910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               258, 79
               

               Conread position:
               1-330
               

               Cow position:
               chr5:2918139-2918472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 122
               

               Conread position:
               1-330
               

               Cow position:
               chr5:3544979-3545311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               93, 270
               

               Conread position:
               1-330
               

               Cow position:
               chr5:3696627-3696956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               1-330
               

               Cow position:
               chr5:4389012-4389342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 130
               

               Conread position:
               1-330
               

               Cow position:
               chr5:5924299-5923963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:6059948-6059615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:6584846-6584515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 87
               

               Conread position:
               1-330
               

               Cow position:
               chr5:7007120-7006779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:8159821-8159488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               94, 147
               

               Conread position:
               1-330
               

               Cow position:
               chr5:10922843-10923172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 35
               

               Conread position:
               1-330
               

               Cow position:
               chr5:11986500-11986164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:12324890-12324554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:13127844-13127508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:17982729-17982396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 191
               

               Conread position:
               1-330
               

               Cow position:
               chr5:18557734-18557410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               93, 188
               

               Conread position:
               1-330
               

               Cow position:
               chr5:27933428-27933764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-330
               

               Cow position:
               chr5:28247836-28248162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               1-330
               

               Cow position:
               chr5:37288868-37289196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               93, 204
               

               Conread position:
               1-330
               

               Cow position:
               chr5:37430832-37430496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               93, 86
               

               Conread position:
               1-330
               

               Cow position:
               chr5:44276279-44276612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               95, 205
               

               Conread position:
               1-330
               

               Cow position:
               chr5:47750609-47750940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               251, 267
               

               Conread position:
               1-330
               

               Cow position:
               chr5:49522387-49522721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 209
               

               Conread position:
               1-330
               

               Cow position:
               chr5:50979461-50979795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               7, 222
               

               Conread position:
               1-330
               

               Cow position:
               chr5:51936820-51937148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 98
               

               Conread position:
               1-330
               

               Cow position:
               chr5:58246015-58246347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 142
               

               Conread position:
               1-330
               

               Cow position:
               chr5:58322052-58321708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               92, 248
               

               Conread position:
               1-330
               

               Cow position:
               chr5:59135103-59135438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               87, 301
               

               Conread position:
               1-330
               

               Cow position:
               chr5:70593321-70592989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 264
               

               Conread position:
               1-332
               

               Cow position:
               chr5:33414746-33414417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 139
               

               Conread position:
               1-333
               

               Cow position:
               chr5:6986817-6987156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 253
               

               Conread position:
               1-333
               

               Cow position:
               chr5:14420686-14420350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 289
               

               Conread position:
               1-333
               

               Cow position:
               chr5:59065127-59065467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-333
               

               Cow position:
               chr5:59877079-59876737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               93, 128
               

               Conread position:
               1-333
               

               Cow position:
               chr5:64778322-64777991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               93, 264
               

               Conread position:
               1-334
               

               Cow position:
               chr5:57987162-57987502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1-339
               

               Cow position:
               chr5:63840485-63840148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 77
               

               Conread position:
               1-340
               

               Cow position:
               chr5:34709451-34709798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 270
               

               Conread position:
               1-340
               

               Cow position:
               chr5:35207920-35208264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 255
               

               Conread position:
               1-340
               

               Cow position:
               chr5:39094213-39094555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               1-341
               

               Cow position:
               chr5:21944040-21944397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 349
               

               Conread position:
               1-341
               

               Cow position:
               chr5:23140918-23140579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               1-342
               

               Cow position:
               chr5:442630-442288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               93, 87
               

               Conread position:
               1-342
               

               Cow position:
               chr5:14141346-14141694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 142
               

               Conread position:
               1-342
               

               Cow position:
               chr5:20107348-20107002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               87, 120
               

               Conread position:
               1-342
               

               Cow position:
               chr5:34528224-34528555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 13
               

               Conread position:
               1-342
               

               Cow position:
               chr5:42667733-42667388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 143
               

               Conread position:
               1-342
               

               Cow position:
               chr5:47871392-47871040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 111
               

               Conread position:
               1-342
               

               Cow position:
               chr5:50622562-50622216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 222
               

               Conread position:
               1-342
               

               Cow position:
               chr5:53855361-53855699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               1-344
               

               Cow position:
               chr5:13453558-13453208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               94, 271
               

               Conread position:
               1-346
               

               Cow position:
               chr5:6130015-6130359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               93, 128
               

               Conread position:
               1-346
               

               Cow position:
               chr5:47704476-47704122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 336
               

               Conread position:
               1-347
               

               Cow position:
               chr5:472969-472614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               11, 353
               

               Conread position:
               1-347
               

               Cow position:
               chr5:70290144-70290489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               93, 204
               

               Conread position:
               1-348
               

               Cow position:
               chr5:44752654-44752309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               1-348
               

               Cow position:
               chr5:73967773-73967421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               93, 270
               

               Conread position:
               1-350
               

               Cow position:
               chr5:9430815-9430453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               104, 216
               

               Conread position:
               1-350
               

               Cow position:
               chr5:21828515-21828877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 217
               

               Conread position:
               1-350
               

               Cow position:
               chr5:36793688-36794046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 216
               

               Conread position:
               1-350
               

               Cow position:
               chr5:62827095-62826743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 9
               

               Conread position:
               1-351
               

               Cow position:
               chr5:2500534-2500173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               1-352
               

               Cow position:
               chr5:59339477-59339835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 270
               

               Conread position:
               1-352
               

               Cow position:
               chr5:62172065-62172424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               92, 216
               

               Conread position:
               1-352
               

               Cow position:
               chr5:62427924-62428281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 231
               

               Conread position:
               1-353
               

               Cow position:
               chr5:34612457-34612811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 240
               

               Conread position:
               1-353
               

               Cow position:
               chr5:76097806-76097453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               93, 217
               

               Conread position:
               1-354
               

               Cow position:
               chr5:48804762-48804406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               93, 111
               

               Conread position:
               1-355
               

               Cow position:
               chr5:40357228-40356850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 195
               

               Conread position:
               1-366
               

               Cow position:
               chr5:7175982-7176349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 191
               

               Conread position:
               1-369
               

               Cow position:
               chr5:17027757-17028119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               99, 129
               

               Conread position:
               1-369
               

               Cow position:
               chr5:20783286-20783644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               62, 131
               

               Conread position:
               1-369
               

               Cow position:
               chr5:27403581-27403205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 87
               

               Conread position:
               1-369
               

               Cow position:
               chr5:34115307-34115677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               93, 211
               

               Conread position:
               1-369
               

               Cow position:
               chr5:56523833-56524198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 130
               

               Conread position:
               1-372
               

               Cow position:
               chr5:7763737-7764101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 9
               

               Conread position:
               1-372
               

               Cow position:
               chr5:10261583-10261206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               261
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 132
               

               Conread position:
               1-374
               

               Cow position:
               chr5:15598574-15598198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               1-375
               

               Cow position:
               chr5:31480812-31481178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               94, 205
               

               Conread position:
               1-385
               

               Cow position:
               chr5:24086018-24085638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               87, 185
               

               Conread position:
               2-124
               

               Cow position:
               chr5:36867935-36868061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               2-222
               

               Cow position:
               chr5:12873408-12873626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               2-255
               

               Cow position:
               chr5:26133414-26133162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 216
               

               Conread position:
               2-256
               

               Cow position:
               chr5:23647349-23647096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               2-279
               

               Cow position:
               chr5:15112570-15112289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 269
               

               Conread position:
               2-301
               

               Cow position:
               chr5:20407998-20407709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               93, 55
               

               Conread position:
               2-301
               

               Cow position:
               chr5:51357842-51357542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 251
               

               Conread position:
               2-302
               

               Cow position:
               chr5:6219763-6220063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 204
               

               Conread position:
               2-306
               

               Cow position:
               chr5:74643999-74643708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               2-308
               

               Cow position:
               chr5:30486911-30487202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 126
               

               Conread position:
               2-309
               

               Cow position:
               chr5:27548827-27548526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               250, 83
               

               Conread position:
               2-309
               

               Cow position:
               chr5:29827713-29828015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 203
               

               Conread position:
               2-309
               

               Cow position:
               chr5:37645725-37646040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               95, 226
               

               Conread position:
               2-309
               

               Cow position:
               chr5:52165519-52165212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 126
               

               Conread position:
               2-318
               

               Cow position:
               chr5:3242805-3242498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               92, 124
               

               Conread position:
               2-318
               

               Cow position:
               chr5:30816375-30816697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 241
               

               Conread position:
               2-318
               

               Cow position:
               chr5:31433937-31434239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               256, 92
               

               Conread position:
               2-318
               

               Cow position:
               chr5:72564419-72564740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               2-339
               

               Cow position:
               chr5:47313133-47313473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 189
               

               Conread position:
               2-348
               

               Cow position:
               chr5:26561804-26562165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               93, 269
               

               Conread position:
               2-349
               

               Cow position:
               chr5:42845940-42845590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               91, 144
               

               Conread position:
               2-371
               

               Cow position:
               chr5:34506266-34505900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 216
               

               Conread position:
               2-375
               

               Cow position:
               chr5:47756428-47756806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 272
               

               Conread position:
               3-211
               

               Cow position:
               chr5:40233793-40234006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 103
               

               Conread position:
               3-243
               

               Cow position:
               chr5:60015581-60015823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               15, 136
               

               Conread position:
               3-286
               

               Cow position:
               chr5:62436809-62437095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               91, 128
               

               Conread position:
               3-326
               

               Cow position:
               chr5:46732676-46732347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 268
               

               Conread position:
               3-354
               

               Cow position:
               chr5:15760703-15760351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               85, 135
               

               Conread position:
               3-385
               

               Cow position:
               chr5:50821449-50821829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               85, 180
               

               Conread position:
               5-118
               

               Cow position:
               chr5:33820847-33820731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-118
               

               Cow position:
               chr5:48938008-48937892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-123
               

               Cow position:
               chr5:73551397-73551276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-133
               

               Cow position:
               chr5:23777965-23778096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-133
               

               Cow position:
               chr5:75726140-75726009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-136
               

               Cow position:
               chr5:73769710-73769840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               5-137
               

               Cow position:
               chr5:825896-826031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-137
               

               Cow position:
               chr5:6124475-6124340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-137
               

               Cow position:
               chr5:42769335-42769200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-137
               

               Cow position:
               chr5:43446494-43446359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-138
               

               Cow position:
               chr5:25935914-25936052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-158
               

               Cow position:
               chr5:1677224-1677068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               5-179
               

               Cow position:
               chr5:15472562-15472384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-195
               

               Cow position:
               chr5:34583628-34583435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-195
               

               Cow position:
               chr5:67584059-67584253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 44
               

               Conread position:
               5-197
               

               Cow position:
               chr5:63305947-63305749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               5-200
               

               Cow position:
               chr5:44707909-44707711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-202
               

               Cow position:
               chr5:34480307-34480107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr5:4041825-4042026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr5:8819662-8819463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 104
               

               Conread position:
               5-203
               

               Cow position:
               chr5:10514808-10515010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr5:24912156-24912357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               5-203
               

               Cow position:
               chr5:27461382-27461181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-203
               

               Cow position:
               chr5:28931037-28931236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 65
               

               Conread position:
               5-206
               

               Cow position:
               chr5:37758140-37757937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               5-207
               

               Cow position:
               chr5:5881083-5880878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-207
               

               Cow position:
               chr5:67598361-67598566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               5-208
               

               Cow position:
               chr5:21188619-21188825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               5-211
               

               Cow position:
               chr5:21005011-21004802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               89, 184
               

               Conread position:
               5-218
               

               Cow position:
               chr5:6454976-6454761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               83, 205
               

               Conread position:
               5-219
               

               Cow position:
               chr5:9001684-9001467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-219
               

               Cow position:
               chr5:10478955-10478739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               5-219
               

               Cow position:
               chr5:53381241-53381457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 205
               

               Conread position:
               5-222
               

               Cow position:
               chr5:38439519-38439739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-227
               

               Cow position:
               chr5:51683579-51683357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-230
               

               Cow position:
               chr5:26053419-26053647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               5-230
               

               Cow position:
               chr5:41332024-41332252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               90, 205
               

               Conread position:
               5-230
               

               Cow position:
               chr5:45179161-45178933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-240
               

               Cow position:
               chr5:40673049-40673281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 113
               

               Conread position:
               5-242
               

               Cow position:
               chr5:33077633-33077873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-250
               

               Cow position:
               chr5:15882813-15882565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               5-252
               

               Cow position:
               chr5:57363114-57362878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               5-254
               

               Cow position:
               chr5:2330793-2330541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               5-254
               

               Cow position:
               chr5:5106911-5107164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-254
               

               Cow position:
               chr5:14653852-14653598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-254
               

               Cow position:
               chr5:37782447-37782198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               247, 83
               

               Conread position:
               5-254
               

               Cow position:
               chr5:40270064-40269816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               94, 195
               

               Conread position:
               5-254
               

               Cow position:
               chr5:58539910-58540155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               91, 24
               

               Conread position:
               5-254
               

               Cow position:
               chr5:70631313-70631062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 175
               

               Conread position:
               5-255
               

               Cow position:
               chr5:17631210-17630954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               5-255
               

               Cow position:
               chr5:50982029-50982281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               83, 124
               

               Conread position:
               5-256
               

               Cow position:
               chr5:24539283-24539031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               5-258
               

               Cow position:
               chr5:57716768-57717023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 227
               

               Conread position:
               5-259
               

               Cow position:
               chr5:3453796-3453538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:9056296-9056038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:9487619-9487363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               86, 191
               

               Conread position:
               5-259
               

               Cow position:
               chr5:17048061-17048327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:19020557-19020297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:19283822-19283564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:35031291-35031549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:41586962-41587219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               85, 221
               

               Conread position:
               5-259
               

               Cow position:
               chr5:42871505-42871763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:46708844-46709101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               5-259
               

               Cow position:
               chr5:48374351-48374609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:49103513-49103771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:52239579-52239321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-259
               

               Cow position:
               chr5:53075182-53074926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 167
               

               Conread position:
               5-259
               

               Cow position:
               chr5:74462366-74462118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               5-260
               

               Cow position:
               chr5:351169-350911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-260
               

               Cow position:
               chr5:36369304-36369046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-260
               

               Cow position:
               chr5:40116090-40115832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-262
               

               Cow position:
               chr5:42283851-42284111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-276
               

               Cow position:
               chr5:10300035-10300310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-278
               

               Cow position:
               chr5:4015091-4014815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               5-285
               

               Cow position:
               chr5:1163686-1163970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-285
               

               Cow position:
               chr5:6616230-6616514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-285
               

               Cow position:
               chr5:46628367-46628651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-286
               

               Cow position:
               chr5:26096960-26097239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               5-287
               

               Cow position:
               chr5:50645789-50645504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 185
               

               Conread position:
               5-291
               

               Cow position:
               chr5:52831111-52831395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               250, 94
               

               Conread position:
               5-294
               

               Cow position:
               chr5:16309270-16309556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               204, 24
               

               Conread position:
               5-299
               

               Cow position:
               chr5:26403840-26403542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 197
               

               Conread position:
               5-301
               

               Cow position:
               chr5:2262711-2262412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               91, 265
               

               Conread position:
               5-307
               

               Cow position:
               chr5:61763078-61762772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-307
               

               Cow position:
               chr5:70960485-70960171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               89, 274
               

               Conread position:
               5-309
               

               Cow position:
               chr5:2428064-2427756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               91, 266
               

               Conread position:
               5-309
               

               Cow position:
               chr5:8178845-8179149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               89, 123
               

               Conread position:
               5-309
               

               Cow position:
               chr5:9873923-9874236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 271
               

               Conread position:
               5-309
               

               Cow position:
               chr5:26647380-26647688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               31, 183
               

               Conread position:
               5-309
               

               Cow position:
               chr5:55430298-55430606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 266
               

               Conread position:
               5-315
               

               Cow position:
               chr5:47959530-47959845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-317
               

               Cow position:
               chr5:38683027-38683335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               247, 35
               

               Conread position:
               5-323
               

               Cow position:
               chr5:52226583-52226258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-328
               

               Cow position:
               chr5:31285545-31285875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-329
               

               Cow position:
               chr5:47343562-47343891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 266
               

               Conread position:
               5-329
               

               Cow position:
               chr5:59450275-59449943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               5-330
               

               Cow position:
               chr5:446182-446514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               5-330
               

               Cow position:
               chr5:1690574-1690906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:2395260-2395591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:3065980-3065648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:3229075-3228743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:4753446-4753114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:4962704-4962380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 208
               

               Conread position:
               5-330
               

               Cow position:
               chr5:6694318-6693986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:6735101-6734769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:9164968-9164636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:10250585-10250253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:10283809-10284143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:10482709-10482377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:10838419-10838089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:13271201-13271533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:14278833-14279165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:15530195-15529866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 219
               

               Conread position:
               5-330
               

               Cow position:
               chr5:15677748-15678076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 199
               

               Conread position:
               5-330
               

               Cow position:
               chr5:18072228-18071899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               5-330
               

               Cow position:
               chr5:18514319-18513987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:20270443-20270775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               85, 266
               

               Conread position:
               5-330
               

               Cow position:
               chr5:22761894-22761562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:23957118-23956789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               5-330
               

               Cow position:
               chr5:24633762-24634094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:26075006-26074674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:26138757-26138425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:26505740-26505410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 263
               

               Conread position:
               5-330
               

               Cow position:
               chr5:27046595-27046927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 293
               

               Conread position:
               5-330
               

               Cow position:
               chr5:29223718-29224038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               5-330
               

               Cow position:
               chr5:29635117-29635449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:30158085-30158417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:31681924-31682254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 185
               

               Conread position:
               5-330
               

               Cow position:
               chr5:34682675-34682345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 73
               

               Conread position:
               5-330
               

               Cow position:
               chr5:35498195-35498527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:35543347-35543679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:37626534-37626862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 230
               

               Conread position:
               5-330
               

               Cow position:
               chr5:37801389-37801721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:38663408-38663738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               85, 185
               

               Conread position:
               5-330
               

               Cow position:
               chr5:39173524-39173192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:41547342-41547014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               74, 183
               

               Conread position:
               5-330
               

               Cow position:
               chr5:42508129-42508461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:43031258-43030926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:44616973-44616641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               83, 292
               

               Conread position:
               5-330
               

               Cow position:
               chr5:46667757-46668085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 118
               

               Conread position:
               5-330
               

               Cow position:
               chr5:46845385-46845053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:47559873-47559548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 208
               

               Conread position:
               5-330
               

               Cow position:
               chr5:48496952-48497283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               85, 124
               

               Conread position:
               5-330
               

               Cow position:
               chr5:49286797-49286468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               90, 59
               

               Conread position:
               5-330
               

               Cow position:
               chr5:49970290-49969958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:51165623-51165292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               83, 291
               

               Conread position:
               5-330
               

               Cow position:
               chr5:52822521-52822189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:54360510-54360178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:54678896-54678564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:54927239-54926907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:54929567-54929239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               247, 80
               

               Conread position:
               5-330
               

               Cow position:
               chr5:55685225-55685557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 83
               

               Conread position:
               5-330
               

               Cow position:
               chr5:55723217-55723548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               89, 106
               

               Conread position:
               5-330
               

               Cow position:
               chr5:57002757-57002425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:57879555-57879880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               83, 137
               

               Conread position:
               5-330
               

               Cow position:
               chr5:58100025-58099695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               83, 267
               

               Conread position:
               5-330
               

               Cow position:
               chr5:58329719-58330051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               5-330
               

               Cow position:
               chr5:58441203-58441535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:59136206-59136540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:59473684-59474016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:59518328-59517994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               90, 294
               

               Conread position:
               5-330
               

               Cow position:
               chr5:68273161-68272829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:72857565-72857897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-330
               

               Cow position:
               chr5:74162034-74161707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               83, 207
               

               Conread position:
               5-333
               

               Cow position:
               chr5:47564629-47564294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-339
               

               Cow position:
               chr5:56879602-56879944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-339
               

               Cow position:
               chr5:58202220-58202563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-339
               

               Cow position:
               chr5:68377279-68377620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 292
               

               Conread position:
               5-342
               

               Cow position:
               chr5:709463-709121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               5-342
               

               Cow position:
               chr5:1282141-1281807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               83, 112
               

               Conread position:
               5-342
               

               Cow position:
               chr5:10772142-10771801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 205
               

               Conread position:
               5-342
               

               Cow position:
               chr5:11780180-11779836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-342
               

               Cow position:
               chr5:19890753-19891097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-342
               

               Cow position:
               chr5:31709980-31710321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-342
               

               Cow position:
               chr5:45881527-45881182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 330
               

               Conread position:
               5-342
               

               Cow position:
               chr5:56931203-56930854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               89, 128
               

               Conread position:
               5-342
               

               Cow position:
               chr5:75725891-75725549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               83, 133
               

               Conread position:
               5-344
               

               Cow position:
               chr5:4600069-4599723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-344
               

               Cow position:
               chr5:37609321-37608975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 292
               

               Conread position:
               5-344
               

               Cow position:
               chr5:41067686-41068029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 172
               

               Conread position:
               5-344
               

               Cow position:
               chr5:46587377-46587031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               5-346
               

               Cow position:
               chr5:45025473-45025124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-347
               

               Cow position:
               chr5:11763497-11763845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 346
               

               Conread position:
               5-347
               

               Cow position:
               chr5:24614109-24614462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               83, 351
               

               Conread position:
               5-347
               

               Cow position:
               chr5:29240132-29240480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 346
               

               Conread position:
               5-347
               

               Cow position:
               chr5:29893650-29893998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 346
               

               Conread position:
               5-347
               

               Cow position:
               chr5:30274402-30274054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 346
               

               Conread position:
               5-347
               

               Cow position:
               chr5:40864687-40865035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 346
               

               Conread position:
               5-347
               

               Cow position:
               chr5:49239920-49240268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 346
               

               Conread position:
               5-347
               

               Cow position:
               chr5:56271448-56271100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 137
               

               Conread position:
               5-347
               

               Cow position:
               chr5:75754435-75754086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 266
               

               Conread position:
               5-352
               

               Cow position:
               chr5:18118287-18117936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               5-352
               

               Cow position:
               chr5:52243752-52243400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-353
               

               Cow position:
               chr5:411032-410681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 237
               

               Conread position:
               5-354
               

               Cow position:
               chr5:247991-248348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-354
               

               Cow position:
               chr5:29255526-29255173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               83, 334
               

               Conread position:
               5-354
               

               Cow position:
               chr5:64062015-64062368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               83, 266
               

               Conread position:
               5-371
               

               Cow position:
               chr5:39363559-39363928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               247, 94
               

               Conread position:
               5-375
               

               Cow position:
               chr5:1058879-1058504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               8, 263
               

               Conread position:
               5-375
               

               Cow position:
               chr5:37380773-37381144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               5-384
               

               Cow position:
               chr5:58323856-58324235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:630868-631248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:2279088-2278708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:4571232-4571618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 378
               

               Conread position:
               5-385
               

               Cow position:
               chr5:4716074-4715694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               263
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               5-385
               

               Cow position:
               chr5:10260738-10260362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               89, 99
               

               Conread position:
               5-385
               

               Cow position:
               chr5:11129688-11130067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               5-385
               

               Cow position:
               chr5:11988794-11988414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:27501289-27500909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:28013545-28013925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 326
               

               Conread position:
               5-385
               

               Cow position:
               chr5:29633296-29632916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:30259043-30258663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:33870155-33869775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:35455458-35455078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               83, 267
               

               Conread position:
               5-385
               

               Cow position:
               chr5:41370997-41371377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 338
               

               Conread position:
               5-385
               

               Cow position:
               chr5:45837507-45837887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 326
               

               Conread position:
               5-385
               

               Cow position:
               chr5:48227481-48227861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:50675015-50674635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 337
               

               Conread position:
               5-385
               

               Cow position:
               chr5:64650791-64651172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 335
               

               Conread position:
               5-386
               

               Cow position:
               chr5:4433969-4433591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 267
               

               Conread position:
               5-624
               

               Cow position:
               chr5:43395980-43396602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               623
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               5-749
               

               Cow position:
               chr5:39368551-39367804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               748
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               6-126
               

               Cow position:
               chr5:10253257-10253380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               6-168
               

               Cow position:
               chr5:5725401-5725240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               6-197
               

               Cow position:
               chr5:37402801-37402998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-200
               

               Cow position:
               chr5:49127402-49127611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-203
               

               Cow position:
               chr5:47347019-47347219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               6-207
               

               Cow position:
               chr5:48244747-48244950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               6-213
               

               Cow position:
               chr5:40614341-40614133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 17
               

               Conread position:
               6-215
               

               Cow position:
               chr5:33189893-33190106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               6-230
               

               Cow position:
               chr5:46597348-46597572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 205
               

               Conread position:
               6-318
               

               Cow position:
               chr5:67932800-67932489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               79, 128
               

               Conread position:
               6-330
               

               Cow position:
               chr5:35807285-35806954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 81
               

               Conread position:
               7-137
               

               Cow position:
               chr5:38838602-38838469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               7-142
               

               Cow position:
               chr5:53001932-53001797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 93
               

               Conread position:
               7-146
               

               Cow position:
               chr5:28807544-28807686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 138
               

               Conread position:
               7-165
               

               Cow position:
               chr5:17645224-17645067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               7-176
               

               Cow position:
               chr5:69466766-69466936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               87, 97
               

               Conread position:
               7-178
               

               Cow position:
               chr5:31635113-31635289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               7-183
               

               Cow position:
               chr5:35762955-35763134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               7-195
               

               Cow position:
               chr5:65017233-65017419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 75
               

               Conread position:
               7-196
               

               Cow position:
               chr5:29675973-29676156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               7-196
               

               Cow position:
               chr5:33251100-33250911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               7-197
               

               Cow position:
               chr5:40559502-40559311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               88, 177
               

               Conread position:
               7-198
               

               Cow position:
               chr5:60447909-60448104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               7-203
               

               Cow position:
               chr5:24919212-24919013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               7-203
               

               Cow position:
               chr5:33270147-33270336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               7-203
               

               Cow position:
               chr5:55684793-55684991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 110
               

               Conread position:
               7-207
               

               Cow position:
               chr5:4084413-4084211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 125
               

               Conread position:
               7-215
               

               Cow position:
               chr5:17102450-17102245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               197, 48
               

               Conread position:
               7-216
               

               Cow position:
               chr5:58208409-58208626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 132
               

               Conread position:
               7-219
               

               Cow position:
               chr5:60968111-60968312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               7-230
               

               Cow position:
               chr5:11976007-11975784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 124
               

               Conread position:
               7-234
               

               Cow position:
               chr5:59147296-59147526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               7-241
               

               Cow position:
               chr5:62268249-62268486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 213
               

               Conread position:
               7-245
               

               Cow position:
               chr5:40961892-40962130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               5, 179
               

               Conread position:
               7-250
               

               Cow position:
               chr5:47846784-47847027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 207
               

               Conread position:
               7-254
               

               Cow position:
               chr5:26058802-26059047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               87, 43
               

               Conread position:
               7-254
               

               Cow position:
               chr5:29563886-29564131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 130
               

               Conread position:
               7-255
               

               Cow position:
               chr5:21547617-21547381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               7-255
               

               Cow position:
               chr5:41469475-41469721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               94, 205
               

               Conread position:
               7-256
               

               Cow position:
               chr5:1398424-1398170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               7-256
               

               Cow position:
               chr5:7740651-7740389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               44, 143
               

               Conread position:
               7-256
               

               Cow position:
               chr5:11645367-11645615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               85, 122
               

               Conread position:
               7-256
               

               Cow position:
               chr5:50864022-50864281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 121
               

               Conread position:
               7-257
               

               Cow position:
               chr5:41953142-41952893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 147
               

               Conread position:
               7-257
               

               Cow position:
               chr5:57613387-57613138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               7-257
               

               Cow position:
               chr5:63967976-63967733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               7-260
               

               Cow position:
               chr5:60947891-60948136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               7-261
               

               Cow position:
               chr5:72045981-72045729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 190
               

               Conread position:
               7-262
               

               Cow position:
               chr5:29431917-29431674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               7-262
               

               Cow position:
               chr5:48238427-48238170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 36
               

               Conread position:
               7-265
               

               Cow position:
               chr5:14832939-14832689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               7-282
               

               Cow position:
               chr5:41981066-41981336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 180
               

               Conread position:
               7-283
               

               Cow position:
               chr5:70102140-70101865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 122
               

               Conread position:
               7-296
               

               Cow position:
               chr5:45846028-45845739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 122
               

               Conread position:
               7-299
               

               Cow position:
               chr5:32153651-32153360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 205
               

               Conread position:
               7-301
               

               Cow position:
               chr5:12323129-12322843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               257, 109
               

               Conread position:
               7-301
               

               Cow position:
               chr5:41392410-41392695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               79, 164
               

               Conread position:
               7-309
               

               Cow position:
               chr5:2332861-2332544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 246
               

               Conread position:
               7-309
               

               Cow position:
               chr5:4710479-4710181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               7-309
               

               Cow position:
               chr5:14538984-14538692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               87, 124
               

               Conread position:
               7-309
               

               Cow position:
               chr5:14550922-14550615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 263
               

               Conread position:
               7-309
               

               Cow position:
               chr5:28946389-28946096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 72
               

               Conread position:
               7-309
               

               Cow position:
               chr5:29771183-29771482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 121
               

               Conread position:
               7-309
               

               Cow position:
               chr5:34678560-34678858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 117
               

               Conread position:
               7-309
               

               Cow position:
               chr5:35209807-35209510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               7-309
               

               Cow position:
               chr5:41523125-41522832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 140
               

               Conread position:
               7-309
               

               Cow position:
               chr5:45940948-45940648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 172
               

               Conread position:
               7-309
               

               Cow position:
               chr5:47317303-47317005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 131
               

               Conread position:
               7-309
               

               Cow position:
               chr5:58793949-58793643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 48
               

               Conread position:
               7-309
               

               Cow position:
               chr5:63103576-63103882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 264
               

               Conread position:
               7-316
               

               Cow position:
               chr5:41951416-41951118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 94
               

               Conread position:
               7-317
               

               Cow position:
               chr5:39299193-39299506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 124
               

               Conread position:
               7-317
               

               Cow position:
               chr5:58855770-58856081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               7-318
               

               Cow position:
               chr5:23856498-23856184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 207
               

               Conread position:
               7-330
               

               Cow position:
               chr5:14542786-14542458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 263
               

               Conread position:
               7-330
               

               Cow position:
               chr5:44848345-44848030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               93, 27
               

               Conread position:
               7-341
               

               Cow position:
               chr5:39258219-39258512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               257, 58
               

               Conread position:
               7-342
               

               Cow position:
               chr5:52645415-52645077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 202
               

               Conread position:
               7-344
               

               Cow position:
               chr5:34638558-34638888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               257, 73
               

               Conread position:
               7-346
               

               Cow position:
               chr5:16206477-16206148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 108
               

               Conread position:
               7-350
               

               Cow position:
               chr5:43923484-43923147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 124
               

               Conread position:
               7-351
               

               Cow position:
               chr5:16508756-16509106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               34, 129
               

               Conread position:
               7-351
               

               Cow position:
               chr5:24485745-24485428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               257, 107
               

               Conread position:
               7-351
               

               Cow position:
               chr5:64524214-64523857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 153
               

               Conread position:
               7-369
               

               Cow position:
               chr5:57074651-57074307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               267, 72
               

               Conread position:
               7-374
               

               Cow position:
               chr5:6086900-6086523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 252
               

               Conread position:
               8-153
               

               Cow position:
               chr5:6197205-6197058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               87, 123
               

               Conread position:
               8-248
               

               Cow position:
               chr5:46334704-46334933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               8-254
               

               Cow position:
               chr5:3696061-3696304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 67
               

               Conread position:
               8-255
               

               Cow position:
               chr5:28374670-28374437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               8-298
               

               Cow position:
               chr5:69099193-69099487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               8-327
               

               Cow position:
               chr5:50729165-50729481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 80
               

               Conread position:
               8-330
               

               Cow position:
               chr5:20971412-20971085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               80, 164
               

               Conread position:
               8-333
               

               Cow position:
               chr5:44583447-44583135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               9-257
               

               Cow position:
               chr5:15088856-15089105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               95, 127
               

               Conread position:
               9-259
               

               Cow position:
               chr5:52269521-52269269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               28, 191
               

               Conread position:
               9-270
               

               Cow position:
               chr5:41608981-41609227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               249, 79
               

               Conread position:
               9-286
               

               Cow position:
               chr5:61725638-61725917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               9-306
               

               Cow position:
               chr5:43330026-43329730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 205
               

               Conread position:
               9-309
               

               Cow position:
               chr5:20344835-20345128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               6, 123
               

               Conread position:
               9-333
               

               Cow position:
               chr5:55821048-55821367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               10-106
               

               Cow position:
               chr5:34885739-34885644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               10-123
               

               Cow position:
               chr5:25913431-25913547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               10-132
               

               Cow position:
               chr5:6032663-6032789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               10-173
               

               Cow position:
               chr5:38286768-38286936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               10-175
               

               Cow position:
               chr5:65312640-65312805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               85, 137
               

               Conread position:
               10-196
               

               Cow position:
               chr5:57787045-57787234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               10-203
               

               Cow position:
               chr5:28650916-28651111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               10-242
               

               Cow position:
               chr5:17384434-17384193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 52
               

               Conread position:
               10-249
               

               Cow position:
               chr5:15478777-15479019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               10-250
               

               Cow position:
               chr5:62272383-62272147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 121
               

               Conread position:
               10-254
               

               Cow position:
               chr5:58519731-58519494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 157
               

               Conread position:
               10-256
               

               Cow position:
               chr5:23535841-23536091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               10-256
               

               Cow position:
               chr5:25729940-25729691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 171
               

               Conread position:
               10-256
               

               Cow position:
               chr5:39675775-39675534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 120
               

               Conread position:
               10-256
               

               Cow position:
               chr5:60901136-60901372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               10-257
               

               Cow position:
               chr5:44380144-44380396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 5
               

               Conread position:
               10-270
               

               Cow position:
               chr5:61030561-61030298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 258
               

               Conread position:
               10-285
               

               Cow position:
               chr5:29741865-29741589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               242, 258
               

               Conread position:
               10-286
               

               Cow position:
               chr5:34887530-34887251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 141
               

               Conread position:
               10-286
               

               Cow position:
               chr5:43457841-43457573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               215, 69
               

               Conread position:
               10-286
               

               Cow position:
               chr5:59082524-59082246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               85, 118
               

               Conread position:
               10-300
               

               Cow position:
               chr5:22071747-22072050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               69, 213
               

               Conread position:
               10-301
               

               Cow position:
               chr5:26467290-26467581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 137
               

               Conread position:
               10-307
               

               Cow position:
               chr5:68082291-68082007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               10-309
               

               Cow position:
               chr5:34183886-34184195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               10-309
               

               Cow position:
               chr5:62107821-62107525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               10-309
               

               Cow position:
               chr5:74015608-74015906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 130
               

               Conread position:
               10-310
               

               Cow position:
               chr5:4218549-4218838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 90
               

               Conread position:
               10-317
               

               Cow position:
               chr5:37190425-37190118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 130
               

               Conread position:
               10-318
               

               Cow position:
               chr5:43858760-43858457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 171
               

               Conread position:
               10-324
               

               Cow position:
               chr5:3204506-3204821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 161
               

               Conread position:
               10-342
               

               Cow position:
               chr5:3281200-3280869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 121
               

               Conread position:
               10-350
               

               Cow position:
               chr5:39936771-39937117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 130
               

               Conread position:
               10-350
               

               Cow position:
               chr5:45226161-45225816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 166
               

               Conread position:
               10-351
               

               Cow position:
               chr5:26990066-26990402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               10-375
               

               Cow position:
               chr5:60210471-60210113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               85, 111
               

               Conread position:
               11-197
               

               Cow position:
               chr5:43677007-43676819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               11-222
               

               Cow position:
               chr5:27100951-27101166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 209
               

               Conread position:
               11-255
               

               Cow position:
               chr5:4353684-4353932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               11-255
               

               Cow position:
               chr5:5685390-5685144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 144
               

               Conread position:
               11-255
               

               Cow position:
               chr5:28035392-28035622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               11-257
               

               Cow position:
               chr5:9675925-9675685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               69, 65
               

               Conread position:
               11-259
               

               Cow position:
               chr5:2977497-2977752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               11-286
               

               Cow position:
               chr5:12149215-12149488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               83, 120
               

               Conread position:
               11-286
               

               Cow position:
               chr5:35123875-35123592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 196
               

               Conread position:
               11-300
               

               Cow position:
               chr5:14415440-14415736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               11-300
               

               Cow position:
               chr5:75244617-75244330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               258, 84
               

               Conread position:
               11-307
               

               Cow position:
               chr5:46294998-46294700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 129
               

               Conread position:
               11-309
               

               Cow position:
               chr5:42777444-42777730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               253, 88
               

               Conread position:
               11-309
               

               Cow position:
               chr5:65593546-65593840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               11-313
               

               Cow position:
               chr5:39447866-39447559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 211
               

               Conread position:
               11-317
               

               Cow position:
               chr5:49820811-49821119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 77
               

               Conread position:
               11-318
               

               Cow position:
               chr5:53841953-53842261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               11-318
               

               Cow position:
               chr5:60519844-60520140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 83
               

               Conread position:
               11-330
               

               Cow position:
               chr5:39361437-39361111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               11-330
               

               Cow position:
               chr5:45965983-45965659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 181
               

               Conread position:
               11-330
               

               Cow position:
               chr5:46816418-46816092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               11-330
               

               Cow position:
               chr5:53184805-53184482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 120
               

               Conread position:
               11-333
               

               Cow position:
               chr5:14904387-14904078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               218, 84
               

               Conread position:
               11-333
               

               Cow position:
               chr5:16894100-16893780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 89
               

               Conread position:
               11-342
               

               Cow position:
               chr5:32141028-32140708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 66
               

               Conread position:
               11-342
               

               Cow position:
               chr5:62397024-62397363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               12-203
               

               Cow position:
               chr5:13328439-13328625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               12-215
               

               Cow position:
               chr5:27899442-27899237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               12-227
               

               Cow position:
               chr5:46052134-46051917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               82, 119
               

               Conread position:
               12-255
               

               Cow position:
               chr5:59759063-59759298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               12-256
               

               Cow position:
               chr5:14781217-14780972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               76, 130
               

               Conread position:
               12-264
               

               Cow position:
               chr5:18479099-18479356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               12-309
               

               Cow position:
               chr5:44797045-44796765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               252, 116
               

               Conread position:
               12-311
               

               Cow position:
               chr5:20974776-20974477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 208
               

               Conread position:
               12-329
               

               Cow position:
               chr5:67913450-67913770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 100
               

               Conread position:
               12-346
               

               Cow position:
               chr5:44994375-44994035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 135
               

               Conread position:
               12-351
               

               Cow position:
               chr5:39333889-39333529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 214
               

               Conread position:
               13-145
               

               Cow position:
               chr5:34560812-34560947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               13-190
               

               Cow position:
               chr5:51952028-51952208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               82, 62
               

               Conread position:
               13-207
               

               Cow position:
               chr5:64615688-64615889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               13-231
               

               Cow position:
               chr5:5662796-5662577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               13-236
               

               Cow position:
               chr5:57970396-57970621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               13-240
               

               Cow position:
               chr5:21137596-21137362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               13-248
               

               Cow position:
               chr5:70608666-70608906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               13-250
               

               Cow position:
               chr5:31103972-31104211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 208
               

               Conread position:
               13-255
               

               Cow position:
               chr5:51293060-51292817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               81, 131
               

               Conread position:
               13-256
               

               Cow position:
               chr5:26462322-26462566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 71
               

               Conread position:
               13-256
               

               Cow position:
               chr5:30347283-30347044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               13-257
               

               Cow position:
               chr5:26335448-26335202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 174
               

               Conread position:
               13-257
               

               Cow position:
               chr5:32336378-32336144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               13-257
               

               Cow position:
               chr5:47854190-47854421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               13-257
               

               Cow position:
               chr5:55175716-55175480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               13-258
               

               Cow position:
               chr5:51761499-51761251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 157
               

               Conread position:
               13-259
               

               Cow position:
               chr5:1641568-1641818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               13-269
               

               Cow position:
               chr5:51993546-51993813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 123
               

               Conread position:
               13-270
               

               Cow position:
               chr5:42096299-42096559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 50
               

               Conread position:
               13-289
               

               Cow position:
               chr5:25231336-25231058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               121, 44
               

               Conread position:
               13-300
               

               Cow position:
               chr5:74550139-74550428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               81, 232
               

               Conread position:
               13-302
               

               Cow position:
               chr5:7193103-7193385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               13-309
               

               Cow position:
               chr5:6044957-6045257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 243
               

               Conread position:
               13-309
               

               Cow position:
               chr5:28224125-28224420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 117
               

               Conread position:
               13-309
               

               Cow position:
               chr5:34915812-34916105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 127
               

               Conread position:
               13-309
               

               Cow position:
               chr5:45705718-45706012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 205
               

               Conread position:
               13-309
               

               Cow position:
               chr5:64823633-64823349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               13-342
               

               Cow position:
               chr5:9074063-9073728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 257
               

               Conread position:
               13-367
               

               Cow position:
               chr5:66257317-66257661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 36
               

               Conread position:
               14-195
               

               Cow position:
               chr5:48113043-48113224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               167, 155
               

               Conread position:
               14-203
               

               Cow position:
               chr5:14538028-14537837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               14-207
               

               Cow position:
               chr5:74160084-74160278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               14-207
               

               Cow position:
               chr5:75185023-75184827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               14-208
               

               Cow position:
               chr5:53825198-53825388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 22
               

               Conread position:
               14-227
               

               Cow position:
               chr5:59873852-59873644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               14-249
               

               Cow position:
               chr5:11955816-11955575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               14-250
               

               Cow position:
               chr5:50746411-50746650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 165
               

               Conread position:
               14-256
               

               Cow position:
               chr5:18127312-18127561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               14-257
               

               Cow position:
               chr5:27904097-27904329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               205, 55
               

               Conread position:
               14-259
               

               Cow position:
               chr5:42533044-42532795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               14-309
               

               Cow position:
               chr5:72902230-72902528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               80, 248
               

               Conread position:
               14-317
               

               Cow position:
               chr5:6151158-6150848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               74, 257
               

               Conread position:
               14-385
               

               Cow position:
               chr5:12212501-12212130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               81, 328
               

               Conread position:
               15-204
               

               Cow position:
               chr5:41486941-41487133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               15-254
               

               Cow position:
               chr5:37084371-37084614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               15-255
               

               Cow position:
               chr5:25928013-25927782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               15-255
               

               Cow position:
               chr5:66119583-66119336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               15-256
               

               Cow position:
               chr5:48224898-48224662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               91, 26
               

               Conread position:
               15-286
               

               Cow position:
               chr5:24087358-24087094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               80, 69
               

               Conread position:
               15-317
               

               Cow position:
               chr5:63647794-63647497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               79, 127
               

               Conread position:
               15-333
               

               Cow position:
               chr5:65933256-65932935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 144
               

               Conread position:
               15-349
               

               Cow position:
               chr5:55756768-55756417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 338
               

               Conread position:
               16-168
               

               Cow position:
               chr5:1383676-1383831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               78, 72
               

               Conread position:
               16-203
               

               Cow position:
               chr5:56656961-56656772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               16-217
               

               Cow position:
               chr5:24925507-24925712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 69
               

               Conread position:
               16-217
               

               Cow position:
               chr5:33087898-33088101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               16-232
               

               Cow position:
               chr5:48484034-48484248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               16-261
               

               Cow position:
               chr5:19969358-19969111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 239
               

               Conread position:
               16-285
               

               Cow position:
               chr5:19300106-19299833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 255
               

               Conread position:
               16-330
               

               Cow position:
               chr5:19978212-19977895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               78, 194
               

               Conread position:
               16-346
               

               Cow position:
               chr5:54310997-54311341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               79, 157
               

               Conread position:
               17-193
               

               Cow position:
               chr5:70959820-70959643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               90, 44
               

               Conread position:
               17-250
               

               Cow position:
               chr5:38273744-38273984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               17-269
               

               Cow position:
               chr5:63098283-63098533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               17-318
               

               Cow position:
               chr5:37942118-37941815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 196
               

               Conread position:
               17-330
               

               Cow position:
               chr5:11618467-11618147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               17-347
               

               Cow position:
               chr5:4537875-4538209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               17-369
               

               Cow position:
               chr5:27103116-27102770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               18-228
               

               Cow position:
               chr5:14668602-14668815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               69, 111
               

               Conread position:
               18-255
               

               Cow position:
               chr5:41229387-41229623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 158
               

               Conread position:
               18-285
               

               Cow position:
               chr5:49116660-49116389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               76, 253
               

               Conread position:
               18-339
               

               Cow position:
               chr5:42747838-42748157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 56
               

               Conread position:
               19-249
               

               Cow position:
               chr5:31437333-31437105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               75, 113
               

               Conread position:
               19-300
               

               Cow position:
               chr5:60037972-60037687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               77, 252
               

               Conread position:
               20-309
               

               Cow position:
               chr5:38831317-38831028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 185
               

               Conread position:
               21-255
               

               Cow position:
               chr5:32342719-32342485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 135
               

               Conread position:
               21-324
               

               Cow position:
               chr5:20555069-20554763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 5
               

               Conread position:
               22-193
               

               Cow position:
               chr5:31694025-31693850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               22-230
               

               Cow position:
               chr5:51902474-51902263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               22-236
               

               Cow position:
               chr5:21184646-21184429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               22-241
               

               Cow position:
               chr5:42671350-42671142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               22-330
               

               Cow position:
               chr5:366305-365990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               22-345
               

               Cow position:
               chr5:60715675-60715358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               23-176
               

               Cow position:
               chr5:47857305-47857465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               23-300
               

               Cow position:
               chr5:15462406-15462672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               206, 80
               

               Conread position:
               23-302
               

               Cow position:
               chr5:43990074-43990357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 225
               

               Conread position:
               23-302
               

               Cow position:
               chr5:55942720-55942437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               29, 85
               

               Conread position:
               23-330
               

               Cow position:
               chr5:37271332-37271646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               67, 194
               

               Conread position:
               24-230
               

               Cow position:
               chr5:47036771-47036980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               25-330
               

               Cow position:
               chr5:35280775-35281087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               26-215
               

               Cow position:
               chr5:24175055-24175247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 108
               

               Conread position:
               26-216
               

               Cow position:
               chr5:57113670-57113857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               26-281
               

               Cow position:
               chr5:71794250-71794497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 45
               

               Conread position:
               26-286
               

               Cow position:
               chr5:50722731-50722992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               26-286
               

               Cow position:
               chr5:54875993-54875736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               228, 109
               

               Conread position:
               26-327
               

               Cow position:
               chr5:18702525-18702222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               26-342
               

               Cow position:
               chr5:59303584-59303278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               68, 105
               

               Conread position:
               27-146
               

               Cow position:
               chr5:57736732-57736851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 56
               

               Conread position:
               27-219
               

               Cow position:
               chr5:40767926-40767730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               27-309
               

               Cow position:
               chr5:5111392-5111109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 213
               

               Conread position:
               27-330
               

               Cow position:
               chr5:56234143-56233840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               67, 96
               

               Conread position:
               28-254
               

               Cow position:
               chr5:67644435-67644217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               28-309
               

               Cow position:
               chr5:3491894-3492161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               28-309
               

               Cow position:
               chr5:34463903-34463618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               67, 114
               

               Conread position:
               28-330
               

               Cow position:
               chr5:18716445-18716142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 120
               

               Conread position:
               28-371
               

               Cow position:
               chr5:65941566-65941223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               29-200
               

               Cow position:
               chr5:19817116-19816944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               29-208
               

               Cow position:
               chr5:15391938-15392123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 137
               

               Conread position:
               29-219
               

               Cow position:
               chr5:63033060-63033254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               29-257
               

               Cow position:
               chr5:68461046-68460827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               29-259
               

               Cow position:
               chr5:34249304-34249538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               29-317
               

               Cow position:
               chr5:40831000-40831288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               29-359
               

               Cow position:
               chr5:17087343-17087006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 182
               

               Conread position:
               30-280
               

               Cow position:
               chr5:53735875-53736123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               30-309
               

               Cow position:
               chr5:4797625-4797350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 176
               

               Conread position:
               30-372
               

               Cow position:
               chr5:3281519-3281862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 145
               

               Conread position:
               31-200
               

               Cow position:
               chr5:24221675-24221847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               31-254
               

               Cow position:
               chr5:31640116-31640342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               31-300
               

               Cow position:
               chr5:53055864-53055606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               57, 137
               

               Conread position:
               31-341
               

               Cow position:
               chr5:11676041-11675725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               57, 186
               

               Conread position:
               31-344
               

               Cow position:
               chr5:20341617-20341297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               31-385
               

               Cow position:
               chr5:262139-261785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               64, 308
               

               Conread position:
               31-385
               

               Cow position:
               chr5:58037573-58037219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 311
               

               Conread position:
               32-254
               

               Cow position:
               chr5:15362759-15362983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 175
               

               Conread position:
               32-310
               

               Cow position:
               chr5:50483172-50482898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               63, 178
               

               Conread position:
               33-137
               

               Cow position:
               chr5:20777734-20777627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               33-330
               

               Cow position:
               chr5:37819881-37820186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 55
               

               Conread position:
               33-369
               

               Cow position:
               chr5:65752550-65752884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               33-385
               

               Cow position:
               chr5:10536243-10536601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               62, 350
               

               Conread position:
               34-123
               

               Cow position:
               chr5:56820948-56821037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-258
               

               Cow position:
               chr5:45283920-45283699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               34-309
               

               Cow position:
               chr5:64392846-64393124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               61, 198
               

               Conread position:
               35-257
               

               Cow position:
               chr5:4551825-4552049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               60, 104
               

               Conread position:
               36-285
               

               Cow position:
               chr5:54746162-54745909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 236
               

               Conread position:
               37-285
               

               Cow position:
               chr5:55138780-55139032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 234
               

               Conread position:
               38-330
               

               Cow position:
               chr5:24918200-24918496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               38-330
               

               Cow position:
               chr5:73139877-73139578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               39-200
               

               Cow position:
               chr5:34584969-34585133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               39-286
               

               Cow position:
               chr5:43964271-43964522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 92
               

               Conread position:
               39-330
               

               Cow position:
               chr5:35174607-35174309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 243
               

               Conread position:
               39-341
               

               Cow position:
               chr5:6504169-6503883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               39-370
               

               Cow position:
               chr5:50533683-50533359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               40-341
               

               Cow position:
               chr5:63964483-63964170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 277
               

               Conread position:
               41-216
               

               Cow position:
               chr5:22312166-22312339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               42-203
               

               Cow position:
               chr5:33347965-33348128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               42-211
               

               Cow position:
               chr5:19751558-19751724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               42-317
               

               Cow position:
               chr5:73484887-73484605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 200
               

               Conread position:
               42-319
               

               Cow position:
               chr5:72149951-72150226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               42-324
               

               Cow position:
               chr5:45170061-45170349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               53, 229
               

               Conread position:
               43-385
               

               Cow position:
               chr5:54363773-54364112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               209, 296
               

               Conread position:
               45-253
               

               Cow position:
               chr5:70050456-70050665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 198
               

               Conread position:
               45-330
               

               Cow position:
               chr5:37653983-37654273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 145
               

               Conread position:
               46-330
               

               Cow position:
               chr5:1128832-1128541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               46-330
               

               Cow position:
               chr5:5235558-5235266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 252
               

               Conread position:
               46-344
               

               Cow position:
               chr5:46721183-46721488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 96
               

               Conread position:
               47-309
               

               Cow position:
               chr5:50839553-50839816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               48-285
               

               Cow position:
               chr5:8165786-8166026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               48-342
               

               Cow position:
               chr5:36409842-36409537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               49-248
               

               Cow position:
               chr5:12468442-12468244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               49-316
               

               Cow position:
               chr5:52732450-52732178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               47, 183
               

               Conread position:
               49-375
               

               Cow position:
               chr5:59443544-59443218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               51-302
               

               Cow position:
               chr5:72035376-72035127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 101
               

               Conread position:
               51-330
               

               Cow position:
               chr5:31261760-31262046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 190
               

               Conread position:
               52-205
               

               Cow position:
               chr5:56359434-56359585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 133
               

               Conread position:
               52-242
               

               Cow position:
               chr5:31781955-31782148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               52-255
               

               Cow position:
               chr5:23666548-23666346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               52-347
               

               Cow position:
               chr5:76098537-76098236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 299
               

               Conread position:
               53-176
               

               Cow position:
               chr5:54048502-54048628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               53-302
               

               Cow position:
               chr5:57830296-57830043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 219
               

               Conread position:
               55-209
               

               Cow position:
               chr5:63235188-63235024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               55-285
               

               Cow position:
               chr5:29366722-29366953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 14
               

               Conread position:
               55-285
               

               Cow position:
               chr5:62173386-62173615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 155
               

               Conread position:
               55-309
               

               Cow position:
               chr5:9083047-9083306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               55-309
               

               Cow position:
               chr5:43474567-43474813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               209, 30
               

               Conread position:
               55-310
               

               Cow position:
               chr5:63917694-63917444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               55-330
               

               Cow position:
               chr5:63566019-63566302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 217
               

               Conread position:
               55-342
               

               Cow position:
               chr5:9090307-9090020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 81
               

               Conread position:
               55-385
               

               Cow position:
               chr5:50582580-50582248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 289
               

               Conread position:
               56-309
               

               Cow position:
               chr5:50950267-50950520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 150
               

               Conread position:
               56-317
               

               Cow position:
               chr5:26173652-26173381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 220
               

               Conread position:
               57-260
               

               Cow position:
               chr5:31740495-31740289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               57-327
               

               Cow position:
               chr5:33661569-33661844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               38, 182
               

               Conread position:
               57-328
               

               Cow position:
               chr5:61576255-61576533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               58-300
               

               Cow position:
               chr5:53201404-53201158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               60-369
               

               Cow position:
               chr5:63987729-63987421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               60-375
               

               Cow position:
               chr5:60952380-60952691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               61-195
               

               Cow position:
               chr5:15151761-15151625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               61-256
               

               Cow position:
               chr5:27420002-27419809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 152
               

               Conread position:
               61-309
               

               Cow position:
               chr5:52905769-52905527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               191, 123
               

               Conread position:
               61-330
               

               Cow position:
               chr5:44532619-44532343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               61-369
               

               Cow position:
               chr5:29680797-29681116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               63-250
               

               Cow position:
               chr5:60730007-60730197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               63-270
               

               Cow position:
               chr5:61502874-61503085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               63-300
               

               Cow position:
               chr5:4952477-4952717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 153
               

               Conread position:
               63-302
               

               Cow position:
               chr5:12352061-12351831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               64-301
               

               Cow position:
               chr5:59298237-59298001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               65-339
               

               Cow position:
               chr5:40889560-40889283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               30, 152
               

               Conread position:
               66-259
               

               Cow position:
               chr5:6536235-6536038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               68-260
               

               Cow position:
               chr5:37091049-37090854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               69-259
               

               Cow position:
               chr5:57494688-57494493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               69-342
               

               Cow position:
               chr5:4507234-4506952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               70-330
               

               Cow position:
               chr5:40130070-40129803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               71-330
               

               Cow position:
               chr5:10525076-10524810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               71-342
               

               Cow position:
               chr5:34509433-34509155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               72-300
               

               Cow position:
               chr5:61488378-61488151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               190, 64
               

               Conread position:
               72-309
               

               Cow position:
               chr5:14153872-14154116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               73-285
               

               Cow position:
               chr5:30808886-30808672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               73-317
               

               Cow position:
               chr5:59438906-59439146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               179, 22
               

               Conread position:
               73-328
               

               Cow position:
               chr5:65601194-65601446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 144
               

               Conread position:
               74-203
               

               Cow position:
               chr5:42676969-42677098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-318
               

               Cow position:
               chr5:42063935-42064181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               75-226
               

               Cow position:
               chr5:63992431-63992277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               75-330
               

               Cow position:
               chr5:38608398-38608136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 196
               

               Conread position:
               75-347
               

               Cow position:
               chr5:13630670-13630948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 276
               

               Conread position:
               76-261
               

               Cow position:
               chr5:45192059-45191870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               76-302
               

               Cow position:
               chr5:64139297-64139525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               78-253
               

               Cow position:
               chr5:72701271-72701100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 133
               

               Conread position:
               80-320
               

               Cow position:
               chr5:37366628-37366877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 149
               

               Conread position:
               81-309
               

               Cow position:
               chr5:63388537-63388760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               82-259
               

               Cow position:
               chr5:35724721-35724542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               84-327
               

               Cow position:
               chr5:61600157-61600406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               85-318
               

               Cow position:
               chr5:6575836-6575613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               175, 8
               

               Conread position:
               88-190
               

               Cow position:
               chr5:12867100-12866998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               88-250
               

               Cow position:
               chr5:56568977-56569138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               88-258
               

               Cow position:
               chr5:56648384-56648215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               88-262
               

               Cow position:
               chr5:65924952-65924777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               88-279
               

               Cow position:
               chr5:50975636-50975828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               88-297
               

               Cow position:
               chr5:451167-450956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               88-309
               

               Cow position:
               chr5:4617124-4617333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               88-309
               

               Cow position:
               chr5:11229924-11229703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               88-317
               

               Cow position:
               chr5:61656355-61656582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               185, 127
               

               Conread position:
               88-328
               

               Cow position:
               chr5:12726801-12727045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               88-330
               

               Cow position:
               chr5:23604974-23605219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               164, 119
               

               Conread position:
               88-330
               

               Cow position:
               chr5:27183429-27183675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               88-330
               

               Cow position:
               chr5:44760892-44761138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               88-330
               

               Cow position:
               chr5:46879036-46879282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               88-347
               

               Cow position:
               chr5:22108581-22108320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               164, 179
               

               Conread position:
               88-347
               

               Cow position:
               chr5:22934707-22934444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               88-351
               

               Cow position:
               chr5:62870286-62870036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               221, 56
               

               Conread position:
               88-375
               

               Cow position:
               chr5:34049858-34050148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               166, 121
               

               Conread position:
               88-385
               

               Cow position:
               chr5:49535039-49535333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               164, 251
               

               Conread position:
               89-318
               

               Cow position:
               chr5:28302990-28302772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               90-333
               

               Cow position:
               chr5:65588463-65588694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               175, 38
               

               Conread position:
               91-307
               

               Cow position:
               chr5:16938256-16938043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               159, 95
               

               Conread position:
               93-254
               

               Cow position:
               chr5:24959201-24959041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               93-330
               

               Cow position:
               chr5:29823297-29823539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               94-309
               

               Cow position:
               chr5:59326073-59325869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               164, 34
               

               Conread position:
               94-310
               

               Cow position:
               chr5:46323057-46322843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               161, 130
               

               Conread position:
               94-342
               

               Cow position:
               chr5:32956335-32956094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               164, 36
               

               Conread position:
               96-302
               

               Cow position:
               chr5:67243681-67243886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               40, 157
               

               Conread position:
               97-255
               

               Cow position:
               chr5:25935712-25935864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               97-256
               

               Cow position:
               chr5:27306076-27306233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               97-257
               

               Cow position:
               chr5:1247033-1247190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               97-257
               

               Cow position:
               chr5:14703210-14703049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               97-257
               

               Cow position:
               chr5:53701705-53701546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               102, 42
               

               Conread position:
               97-270
               

               Cow position:
               chr5:69337590-69337756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               167, 28
               

               Conread position:
               97-309
               

               Cow position:
               chr5:1344100-1343888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               161, 22
               

               Conread position:
               97-309
               

               Cow position:
               chr5:48178918-48178711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               164, 58
               

               Conread position:
               97-309
               

               Cow position:
               chr5:58144848-58144635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 115
               

               Conread position:
               97-318
               

               Cow position:
               chr5:56753485-56753706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               161, 39
               

               Conread position:
               97-333
               

               Cow position:
               chr5:32963871-32963638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               212, 39
               

               Conread position:
               97-342
               

               Cow position:
               chr5:54350603-54350361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               167, 108
               

               Conread position:
               97-346
               

               Cow position:
               chr5:51999977-52000228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               161, 39
               

               Conread position:
               97-346
               

               Cow position:
               chr5:55967125-55966876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               170, 155
               

               Conread position:
               97-350
               

               Cow position:
               chr5:35684692-35684947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               163, 168
               

               Conread position:
               97-369
               

               Cow position:
               chr5:43929976-43929711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               159, 104
               

               Conread position:
               97-374
               

               Cow position:
               chr5:72310471-72310740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 114
               

               Conread position:
               98-211
               

               Cow position:
               chr5:57890258-57890371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-224
               

               Cow position:
               chr5:52162358-52162482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               98-257
               

               Cow position:
               chr5:4509251-4509411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               98-257
               

               Cow position:
               chr5:51360704-51360864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-281
               

               Cow position:
               chr5:26541055-26541231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               161, 32
               

               Conread position:
               98-286
               

               Cow position:
               chr5:6032997-6033183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               163, 101
               

               Conread position:
               98-286
               

               Cow position:
               chr5:33537653-33537831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               98-293
               

               Cow position:
               chr5:2851073-2851268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               98-299
               

               Cow position:
               chr5:24642963-24642770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               98-300
               

               Cow position:
               chr5:10789920-10789719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 155
               

               Conread position:
               98-309
               

               Cow position:
               chr5:26099613-26099406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               98-309
               

               Cow position:
               chr5:28229916-28230120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               98-309
               

               Cow position:
               chr5:37814382-37814588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               98-318
               

               Cow position:
               chr5:66831955-66831735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               160, 57
               

               Conread position:
               98-324
               

               Cow position:
               chr5:26046093-26046319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               98-345
               

               Cow position:
               chr5:34922076-34921833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               81, 74
               

               Conread position:
               98-369
               

               Cow position:
               chr5:37714146-37713870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               80, 191
               

               Conread position:
               98-369
               

               Cow position:
               chr5:40928214-40927954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 50
               

               Conread position:
               98-375
               

               Cow position:
               chr5:72903465-72903202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               161, 41
               

               Conread position:
               99-256
               

               Cow position:
               chr5:9499333-9499176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-299
               

               Cow position:
               chr5:32975791-32975595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               153, 30
               

               Conread position:
               99-307
               

               Cow position:
               chr5:12563246-12563042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               76, 37
               

               Conread position:
               99-333
               

               Cow position:
               chr5:49685521-49685277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               99-351
               

               Cow position:
               chr5:37646792-37646537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               37, 139
               

               Conread position:
               100-248
               

               Cow position:
               chr5:32087960-32087812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-271
               

               Cow position:
               chr5:35125777-35125947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               151, 109
               

               Conread position:
               100-296
               

               Cow position:
               chr5:38832878-38833076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 101
               

               Conread position:
               100-309
               

               Cow position:
               chr5:54086301-54086509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               123, 36
               

               Conread position:
               100-311
               

               Cow position:
               chr5:11668417-11668217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               150, 36
               

               Conread position:
               100-318
               

               Cow position:
               chr5:30639089-30638884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               164, 30
               

               Conread position:
               100-318
               

               Cow position:
               chr5:30844873-30845089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               100-318
               

               Cow position:
               chr5:43738187-43737976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               164, 23
               

               Conread position:
               100-318
               

               Cow position:
               chr5:75437136-75436909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               101-282
               

               Cow position:
               chr5:61455516-61455698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               101-369
               

               Cow position:
               chr5:9859956-9859687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               111, 38
               

               Conread position:
               102-309
               

               Cow position:
               chr5:20127817-20128020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               162, 63
               

               Conread position:
               102-318
               

               Cow position:
               chr5:53835478-53835691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               162, 17
               

               Conread position:
               102-340
               

               Cow position:
               chr5:4032226-4031992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               154, 78
               

               Conread position:
               103-299
               

               Cow position:
               chr5:54064543-54064736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               154, 104
               

               Conread position:
               103-318
               

               Cow position:
               chr5:34885392-34885182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               146, 107
               

               Conread position:
               104-333
               

               Cow position:
               chr5:45036785-45037014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               104-351
               

               Cow position:
               chr5:30253510-30253751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               160, 32
               

               Conread position:
               104-375
               

               Cow position:
               chr5:17063329-17063056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               105-266
               

               Cow position:
               chr5:13941274-13941112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               105-369
               

               Cow position:
               chr5:43992091-43992348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               159, 60
               

               Conread position:
               105-373
               

               Cow position:
               chr5:24996458-24996186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               159, 43
               

               Conread position:
               106-309
               

               Cow position:
               chr5:15426295-15426495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               158, 34
               

               Conread position:
               106-310
               

               Cow position:
               chr5:28324112-28324321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               106-319
               

               Cow position:
               chr5:72007086-72006875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               150, 103
               

               Conread position:
               106-326
               

               Cow position:
               chr5:63236091-63235866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               137, 107
               

               Conread position:
               106-348
               

               Cow position:
               chr5:74858340-74858580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               106-369
               

               Cow position:
               chr5:41164855-41165112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               158, 95
               

               Conread position:
               106-369
               

               Cow position:
               chr5:56135202-56134940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               146, 104
               

               Conread position:
               108-333
               

               Cow position:
               chr5:12709655-12709881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 28
               

               Conread position:
               108-375
               

               Cow position:
               chr5:64137020-64137286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               148, 107
               

               Conread position:
               109-250
               

               Cow position:
               chr5:22102543-22102405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               109-300
               

               Cow position:
               chr5:36868515-36868695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               155, 96
               

               Conread position:
               110-286
               

               Cow position:
               chr5:54530753-54530926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               110-340
               

               Cow position:
               chr5:41303320-41303087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 128
               

               Conread position:
               110-371
               

               Cow position:
               chr5:56070624-56070886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               110-471
               

               Cow position:
               chr5:28926414-28926056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               135, 37
               

               Conread position:
               112-351
               

               Cow position:
               chr5:56820487-56820254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               148, 55
               

               Conread position:
               113-309
               

               Cow position:
               chr5:18090501-18090690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               151, 78
               

               Conread position:
               114-308
               

               Cow position:
               chr5:64176346-64176152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               150, 138
               

               Conread position:
               114-309
               

               Cow position:
               chr5:5257522-5257327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               88, 136
               

               Conread position:
               116-369
               

               Cow position:
               chr5:48757721-48757964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               118-316
               

               Cow position:
               chr5:16025682-16025485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               149, 134
               

               Conread position:
               118-318
               

               Cow position:
               chr5:56028751-56028550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               146, 18
               

               Conread position:
               119-318
               

               Cow position:
               chr5:2309785-2309579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               119-318
               

               Cow position:
               chr5:11427463-11427257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               121-296
               

               Cow position:
               chr5:66281011-66280838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               121-309
               

               Cow position:
               chr5:7044929-7044741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               123-342
               

               Cow position:
               chr5:49362207-49361989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               134, 26
               

               Conread position:
               125-318
               

               Cow position:
               chr5:35235923-35235731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               139, 84
               

               Conread position:
               128-346
               

               Cow position:
               chr5:29212737-29212949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               133, 72
               

               Conread position:
               130-302
               

               Cow position:
               chr5:35969333-35969500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               130, 80
               

               Conread position:
               130-302
               

               Cow position:
               chr5:62142460-62142629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 81
               

               Conread position:
               130-309
               

               Cow position:
               chr5:40039980-40039804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 87
               

               Conread position:
               130-318
               

               Cow position:
               chr5:71494607-71494797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               130-334
               

               Cow position:
               chr5:18898774-18898970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 67
               

               Conread position:
               131-309
               

               Cow position:
               chr5:57706707-57706886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 137
               

               Conread position:
               131-318
               

               Cow position:
               chr5:57271473-57271287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               132-342
               

               Cow position:
               chr5:51053855-51053649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               134-310
               

               Cow position:
               chr5:50870333-50870513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr5:8994770-8994601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               139-276
               

               Cow position:
               chr5:9390335-9390472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-311
               

               Cow position:
               chr5:56518410-56518243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               125, 71
               

               Conread position:
               141-309
               

               Cow position:
               chr5:57575567-57575735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               146-309
               

               Cow position:
               chr5:34561815-34561978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 106
               

               Conread position:
               149-309
               

               Cow position:
               chr5:4220790-4220950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 103
               
Show alignments to all cow chromosomes.
Conread position:	1-93
Cow position:	chr5:68871818-68871910 (view UCSC Genome Browser custom track)
Alignm length:	93
Alignm identity:	79
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-108
Cow position:	chr5:6670497-6670387 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	94
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	92, 0
Conread position:	1-118
Cow position:	chr5:3966995-3967116 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	101
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	93, 87
Conread position:	1-121
Cow position:	chr5:15425904-15426024 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	96
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	39, 101
Conread position:	1-124
Cow position:	chr5:15722636-15722510 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	104
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	94, 0
Conread position:	1-126
Cow position:	chr5:5848800-5848675 (view UCSC Genome Browser custom track)
Alignm length:	126
Alignm identity:	97
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-130
Cow position:	chr5:12105460-12105591 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	109
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	94, 120
Conread position:	1-134
Cow position:	chr5:5081141-5081277 (view UCSC Genome Browser custom track)
Alignm length:	137
Alignm identity:	116
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	89, 0
Conread position:	1-137
Cow position:	chr5:10417664-10417525 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	118
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	87, 0
Conread position:	1-138
Cow position:	chr5:61054972-61054831 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	114
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	14, 0
Conread position:	1-141
Cow position:	chr5:5785780-5785637 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	112
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	94, 0
Conread position:	1-142
Cow position:	chr5:30978044-30978188 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	115
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	96, 0
Conread position:	1-144
Cow position:	chr5:28456854-28456712 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	121
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	94, 122
Conread position:	1-147
Cow position:	chr5:71846079-71846228 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	121
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	93, 0
Conread position:	1-152
Cow position:	chr5:56137235-56137385 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	128
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	9, 0
Conread position:	1-157
Cow position:	chr5:9385328-9385172 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	127
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	93, 87
Conread position:	1-160
Cow position:	chr5:60215453-60215612 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	129
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	0, 0
Conread position:	1-161
Cow position:	chr5:12161245-12161083 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	130
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	87, 0
Conread position:	1-162
Cow position:	chr5:29843969-29844130 (view UCSC Genome Browser custom track)
Alignm length:	165
Alignm identity:	122
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	94, 130
Conread position:	1-167
Cow position:	chr5:7921723-7921551 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	135
Alignm E-value:	7e-33
Alignm gaps (pig, cow):	98, 0