Cow genome map
| Conread name: | Ss1.1-risp13_o6.5 |
| Conread position: | 33-489 |
| Cow position: | chr10:39758238-39757751 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 239-475 |
| Cow position: | chr10:47963171-47963412 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 45 |
| Conread position: | 239-487 |
| Cow position: | chr10:7501358-7501106 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 239-489 |
| Cow position: | chr10:7653130-7652880 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 239-540 |
| Cow position: | chr10:35326067-35326380 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 240-489 |
| Cow position: | chr10:24959558-24959813 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 95 |
| Conread position: | 246-490 |
| Cow position: | chr10:43342754-43343005 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 247-444 |
| Cow position: | chr10:37220001-37219801 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 248-488 |
| Cow position: | chr10:20951210-20950966 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 259-762 |
| Cow position: | chr10:52048508-52048006 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 261-547 |
| Cow position: | chr10:23865589-23865886 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 246 |
| Conread position: | 263-642 |
| Cow position: | chr10:61134355-61133963 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 237 |
| Conread position: | 264-764 |
| Cow position: | chr10:47700181-47699656 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 301 |
| Conread position: | 267-486 |
| Cow position: | chr10:28790440-28790654 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 95 |
| Conread position: | 269-489 |
| Cow position: | chr10:9876418-9876202 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 269-489 |
| Cow position: | chr10:10396313-10396538 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 188 |
| Conread position: | 320-762 |
| Cow position: | chr10:42102926-42102480 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 51, 82 |
Show alignments to all cow chromosomes.