Cow genome map
| Conread name: | Ss1.1-risp13_o6.5 |
| Conread position: | 59-489 |
| Cow position: | chr11:20971142-20970711 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 104 |
| Conread position: | 188-484 |
| Cow position: | chr11:52843717-52843408 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 58, 256 |
| Conread position: | 203-426 |
| Cow position: | chr11:15470433-15470197 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 5 |
| Conread position: | 239-431 |
| Cow position: | chr11:22291558-22291752 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 137, 15 |
| Conread position: | 240-651 |
| Cow position: | chr11:52889654-52889216 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 202 |
| Conread position: | 244-487 |
| Cow position: | chr11:9787724-9787475 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 244-489 |
| Cow position: | chr11:68276761-68276507 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 244-547 |
| Cow position: | chr11:45459565-45459876 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 251 |
| Conread position: | 244-722 |
| Cow position: | chr11:56706652-56706168 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 248-554 |
| Cow position: | chr11:60718860-60719174 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 257-462 |
| Cow position: | chr11:19426722-19426931 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 261-489 |
| Cow position: | chr11:10154504-10154729 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 21 |
| Conread position: | 261-489 |
| Cow position: | chr11:49982938-49982703 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 160 |
| Conread position: | 261-546 |
| Cow position: | chr11:15537990-15537700 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 261-759 |
| Cow position: | chr11:52248638-52248115 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 334 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 80, 44 |
| Conread position: | 261-767 |
| Cow position: | chr11:10553813-10554332 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 331 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 262-486 |
| Cow position: | chr11:54509581-54509352 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 262-489 |
| Cow position: | chr11:54316862-54316635 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 263-487 |
| Cow position: | chr11:68664732-68664506 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 263-766 |
| Cow position: | chr11:39433119-39432589 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 345 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 269-479 |
| Cow position: | chr11:77023187-77022976 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 317-692 |
| Cow position: | chr11:302014-302404 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 320-767 |
| Cow position: | chr11:52127301-52127763 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 237 |
Show alignments to all cow chromosomes.