Cow genome map


           Conread name:
           Ss1.1-risp13_o6.5
        

               Conread position:
               90-379
               

               Cow position:
               chr29:23550127-23550432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 282
               

               Conread position:
               239-480
               

               Cow position:
               chr29:16459405-16459164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 56
               

               Conread position:
               239-489
               

               Cow position:
               chr29:9511121-9511377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               239-489
               

               Cow position:
               chr29:26010340-26010086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               239-768
               

               Cow position:
               chr29:26217008-26216457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               561
               

               Alignm identity:
               357
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               253-487
               

               Cow position:
               chr29:8035517-8035272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               259-490
               

               Cow position:
               chr29:9801538-9801304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 212
               

               Conread position:
               265-487
               

               Cow position:
               chr29:3663973-3663744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               34, 101
               

               Conread position:
               320-489
               

               Cow position:
               chr29:27306083-27305915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 89
               
Show alignments to all cow chromosomes.