Cow genome map
| Conread name: | Ss1.1-risp13_o6.5 |
| Conread position: | 29-489 |
| Cow position: | chr3:73655085-73655572 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 206 |
| Conread position: | 69-482 |
| Cow position: | chr3:36851660-36851254 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 186-497 |
| Cow position: | chr3:64410660-64410976 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 237-489 |
| Cow position: | chr3:15201845-15201586 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 237-489 |
| Cow position: | chr3:68357535-68357797 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 239 |
| Conread position: | 238-489 |
| Cow position: | chr3:70701830-70701574 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 239-480 |
| Cow position: | chr3:55731102-55731339 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 239-487 |
| Cow position: | chr3:15308344-15308097 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 244-717 |
| Cow position: | chr3:58105265-58104747 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 334 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 368 |
| Conread position: | 245-489 |
| Cow position: | chr3:42216517-42216771 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 238 |
| Conread position: | 246-489 |
| Cow position: | chr3:7543906-7543656 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 81, 159 |
| Conread position: | 246-489 |
| Cow position: | chr3:66284540-66284783 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 10 |
| Conread position: | 248-464 |
| Cow position: | chr3:67530441-67530666 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 248-489 |
| Cow position: | chr3:71479095-71479340 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 258-487 |
| Cow position: | chr3:23751563-23751323 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 261-537 |
| Cow position: | chr3:23229795-23230075 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 45, 211 |
| Conread position: | 270-478 |
| Cow position: | chr3:55140202-55140410 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 134 |
| Conread position: | 321-767 |
| Cow position: | chr3:66042684-66043136 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 143 |
Show alignments to all cow chromosomes.