Cow genome map
| Conread name: | Ss1.1-risp13_o6.5 |
| Conread position: | 239-462 |
| Cow position: | chr5:2020126-2019908 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 239-487 |
| Cow position: | chr5:42918324-42918579 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 240-484 |
| Cow position: | chr5:64797663-64797417 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 240-754 |
| Cow position: | chr5:5309366-5308839 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 185 |
| Conread position: | 244-547 |
| Cow position: | chr5:15765285-15764967 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 206 |
| Conread position: | 244-657 |
| Cow position: | chr5:39036626-39036210 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 146, 76 |
| Conread position: | 245-695 |
| Cow position: | chr5:28346135-28345670 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 245-767 |
| Cow position: | chr5:63631761-63631217 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 233 |
| Conread position: | 247-491 |
| Cow position: | chr5:41517407-41517656 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 169 |
| Conread position: | 254-490 |
| Cow position: | chr5:53630800-53630563 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 122, 104 |
| Conread position: | 261-489 |
| Cow position: | chr5:40673242-40673010 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 261-489 |
| Cow position: | chr5:58526142-58526367 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 274-546 |
| Cow position: | chr5:57791197-57791476 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 274-724 |
| Cow position: | chr5:3690712-3690233 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 321 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 275-764 |
| Cow position: | chr5:29969479-29968958 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 234 |
| Conread position: | 320-488 |
| Cow position: | chr5:67623944-67623772 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 115 |
Show alignments to all cow chromosomes.