Cow genome map


           Conread name:
           Ss1.1-risp13_o6.5
        

               Conread position:
               31-431
               

               Cow position:
               chr8:2345672-2345242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               203-757
               

               Cow position:
               chr8:14968539-14969114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               587
               

               Alignm identity:
               377
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               218-756
               

               Cow position:
               chr8:31982948-31982386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               361
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 232
               

               Conread position:
               233-767
               

               Cow position:
               chr8:29499190-29499736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               348
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 251
               

               Conread position:
               234-487
               

               Cow position:
               chr8:38489094-38488837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               234-495
               

               Cow position:
               chr8:46614249-46613982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 19
               

               Conread position:
               250-627
               

               Cow position:
               chr8:36855781-36856185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 193
               

               Conread position:
               320-487
               

               Cow position:
               chr8:37532370-37532198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               322-490
               

               Cow position:
               chr8:32583290-32583457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 81
               
Show alignments to all cow chromosomes.