Cow genome map


           Conread name:
           Ss1.1-risp13_o6.5
        

               Conread position:
               239-759
               

               Cow position:
               chr9:24870784-24871315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               333
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 56
               

               Conread position:
               244-486
               

               Cow position:
               chr9:39717500-39717750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               244-489
               

               Cow position:
               chr9:47170300-47170053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               246-488
               

               Cow position:
               chr9:23842352-23842107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 229
               

               Conread position:
               249-485
               

               Cow position:
               chr9:22772819-22773064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               255-724
               

               Cow position:
               chr9:34131730-34132216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 151
               

               Conread position:
               257-485
               

               Cow position:
               chr9:57127190-57126949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 228
               

               Conread position:
               307-490
               

               Cow position:
               chr9:18717469-18717645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 0
               
Show alignments to all cow chromosomes.