Cow genome map
| Conread name: | Ss1.1-risp13_o6.5 |
| Conread position: | 234-767 |
| Cow position: | chrX:23831564-23832111 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 350 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 237 |
| Conread position: | 240-460 |
| Cow position: | chrX:1083050-1082830 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 248-480 |
| Cow position: | chrX:18896547-18896782 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 248-489 |
| Cow position: | chrX:28666097-28666345 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 258-762 |
| Cow position: | chrX:19540484-19541008 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 343 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 259-622 |
| Cow position: | chrX:221383-221004 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 261-487 |
| Cow position: | chrX:25039446-25039214 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 149 |
| Conread position: | 264-462 |
| Cow position: | chrX:39125376-39125176 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 265-489 |
| Cow position: | chrX:16776202-16775973 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 274-760 |
| Cow position: | chrX:3628618-3628103 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 277-690 |
| Cow position: | chrX:20687831-20687400 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 287-487 |
| Cow position: | chrX:32114941-32114732 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 298-489 |
| Cow position: | chrX:1134622-1134428 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 319-764 |
| Cow position: | chrX:18897851-18898323 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 190 |
| Conread position: | 324-767 |
| Cow position: | chrX:25280056-25280498 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 158 |
Show alignments to all cow chromosomes.