Cow genome map
| Conread name: | Ss1.1-risp39_i19.5 |
| Conread position: | 11-480 |
| Cow position: | chr11:73463067-73462599 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 350, 449 |
| Conread position: | 106-533 |
| Cow position: | chr11:15983936-15984370 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 138-433 |
| Cow position: | chr11:46246221-46245920 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 159-540 |
| Cow position: | chr11:27669976-27669594 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 77, 118 |
| Conread position: | 168-505 |
| Cow position: | chr11:10091053-10091390 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 168-536 |
| Cow position: | chr11:33194185-33193819 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 168-536 |
| Cow position: | chr11:67846195-67845827 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 168-574 |
| Cow position: | chr11:53286791-53286386 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 182-412 |
| Cow position: | chr11:28702394-28702628 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 184-540 |
| Cow position: | chr11:10216950-10216598 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 154, 51 |
| Conread position: | 185-456 |
| Cow position: | chr11:16985928-16985663 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 165, 83 |
| Conread position: | 185-525 |
| Cow position: | chr11:20510785-20511122 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 62 |
| Conread position: | 185-538 |
| Cow position: | chr11:40775612-40775270 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 132 |
| Conread position: | 185-540 |
| Cow position: | chr11:37476609-37476259 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 167, 11 |
| Conread position: | 186-325 |
| Cow position: | chr11:62229577-62229711 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 186-333 |
| Cow position: | chr11:44491885-44491738 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-354 |
| Cow position: | chr11:47738626-47738458 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-358 |
| Cow position: | chr11:21930855-21930683 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-384 |
| Cow position: | chr11:67866255-67866056 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 5 |
| Conread position: | 186-412 |
| Cow position: | chr11:32480788-32480559 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 166, 184 |
| Conread position: | 186-426 |
| Cow position: | chr11:42432538-42432767 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 186-451 |
| Cow position: | chr11:76373826-76373562 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 164, 40 |
| Conread position: | 186-458 |
| Cow position: | chr11:4027170-4026896 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 42 |
| Conread position: | 186-459 |
| Cow position: | chr11:36924293-36924014 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 181, 110 |
| Conread position: | 186-469 |
| Cow position: | chr11:26070654-26070382 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 39 |
| Conread position: | 186-485 |
| Cow position: | chr11:52419780-52420088 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 186-486 |
| Cow position: | chr11:30252587-30252891 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 186-489 |
| Cow position: | chr11:66727763-66728072 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 186-504 |
| Cow position: | chr11:23877685-23878005 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 117 |
| Conread position: | 186-505 |
| Cow position: | chr11:31874389-31874076 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 166, 200 |
| Conread position: | 186-505 |
| Cow position: | chr11:36743791-36743466 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 186-520 |
| Cow position: | chr11:31926562-31926891 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 53 |
| Conread position: | 186-531 |
| Cow position: | chr11:45922220-45921879 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 108, 248 |
| Conread position: | 186-532 |
| Cow position: | chr11:38835045-38834701 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 88 |
| Conread position: | 186-532 |
| Cow position: | chr11:67450882-67451228 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 309 |
| Conread position: | 186-533 |
| Cow position: | chr11:3493384-3493729 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 275 |
| Conread position: | 186-533 |
| Cow position: | chr11:10847840-10848186 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-533 |
| Cow position: | chr11:12358027-12357680 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 310 |
| Conread position: | 186-533 |
| Cow position: | chr11:19063683-19063337 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 308 |
| Conread position: | 186-533 |
| Cow position: | chr11:19102106-19101760 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-533 |
| Cow position: | chr11:24336800-24336463 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 207, 127 |
| Conread position: | 186-533 |
| Cow position: | chr11:26124537-26124191 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-533 |
| Cow position: | chr11:28054219-28053879 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 91 |
| Conread position: | 186-533 |
| Cow position: | chr11:41170306-41169960 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 309 |
| Conread position: | 186-533 |
| Cow position: | chr11:43514243-43513897 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-533 |
| Cow position: | chr11:44156856-44156512 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 12 |
| Conread position: | 186-533 |
| Cow position: | chr11:44252189-44252531 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 177 |
| Conread position: | 186-533 |
| Cow position: | chr11:45654626-45654284 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 164, 117 |
| Conread position: | 186-533 |
| Cow position: | chr11:58134783-58135129 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 242 |
| Conread position: | 186-533 |
| Cow position: | chr11:85393415-85393079 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 65 |
| Conread position: | 186-534 |
| Cow position: | chr11:4269997-4269666 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 50 |
| Conread position: | 186-534 |
| Cow position: | chr11:29668219-29667871 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 321 |
| Conread position: | 186-534 |
| Cow position: | chr11:32452217-32452563 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 186-536 |
| Cow position: | chr11:63654947-63654599 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 200 |
| Conread position: | 186-538 |
| Cow position: | chr11:71329982-71330331 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 178 |
| Conread position: | 186-539 |
| Cow position: | chr11:9156766-9156415 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 98 |
| Conread position: | 186-539 |
| Cow position: | chr11:71982134-71981777 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 96 |
| Conread position: | 186-540 |
| Cow position: | chr11:4057087-4056734 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 110 |
| Conread position: | 186-540 |
| Cow position: | chr11:11988501-11988868 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 323 |
| Conread position: | 186-540 |
| Cow position: | chr11:28108526-28108883 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-540 |
| Cow position: | chr11:36763140-36763495 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 133 |
| Conread position: | 186-540 |
| Cow position: | chr11:53431669-53431316 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 320 |
| Conread position: | 186-540 |
| Cow position: | chr11:54485024-54484669 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 126 |
| Conread position: | 186-540 |
| Cow position: | chr11:61400670-61400321 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 122 |
| Conread position: | 186-540 |
| Cow position: | chr11:73477698-73478051 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-571 |
| Cow position: | chr11:1495699-1495316 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 308 |
| Conread position: | 186-571 |
| Cow position: | chr11:4034947-4034575 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 211, 102 |
| Conread position: | 186-571 |
| Cow position: | chr11:17107297-17106912 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 309 |
| Conread position: | 186-571 |
| Cow position: | chr11:17546557-17546934 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 94 |
| Conread position: | 186-571 |
| Cow position: | chr11:20733852-20733465 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 308 |
| Conread position: | 186-571 |
| Cow position: | chr11:28229366-28228980 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 224 |
| Conread position: | 186-573 |
| Cow position: | chr11:12093956-12094354 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 232 |
| Conread position: | 186-574 |
| Cow position: | chr11:5342532-5342130 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 311 |
| Conread position: | 186-574 |
| Cow position: | chr11:24393709-24394102 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 102 |
| Conread position: | 186-574 |
| Cow position: | chr11:47759888-47759492 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 186-574 |
| Cow position: | chr11:64081693-64081293 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-575 |
| Cow position: | chr11:9216688-9216292 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 187-482 |
| Cow position: | chr11:9734282-9733992 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 145 |
| Conread position: | 192-325 |
| Cow position: | chr11:10869143-10869274 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 192-424 |
| Cow position: | chr11:14728735-14728503 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 192-562 |
| Cow position: | chr11:21443692-21444054 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 158, 34 |
| Conread position: | 193-333 |
| Cow position: | chr11:7116621-7116761 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-536 |
| Cow position: | chr11:49409135-49409461 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 118, 13 |
| Conread position: | 194-486 |
| Cow position: | chr11:30188242-30188535 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 40 |
| Conread position: | 201-382 |
| Cow position: | chr11:22935484-22935661 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 151, 25 |
| Conread position: | 201-540 |
| Cow position: | chr11:26564675-26564347 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 151, 119 |
| Conread position: | 202-397 |
| Cow position: | chr11:52885295-52885491 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 142, 99 |
| Conread position: | 202-532 |
| Cow position: | chr11:4063450-4063135 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 57 |
| Conread position: | 202-533 |
| Cow position: | chr11:31861313-31861632 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 150, 7 |
| Conread position: | 203-571 |
| Cow position: | chr11:53681820-53682192 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 150, 323 |
| Conread position: | 205-469 |
| Cow position: | chr11:28391052-28391317 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 59 |
| Conread position: | 207-539 |
| Cow position: | chr11:23127483-23127154 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 139, 29 |
| Conread position: | 209-540 |
| Cow position: | chr11:9601920-9601580 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 254 |
| Conread position: | 220-533 |
| Cow position: | chr11:27058695-27058377 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 144 |
| Conread position: | 221-526 |
| Cow position: | chr11:49553735-49553447 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 229-533 |
| Cow position: | chr11:30123413-30123110 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 232-531 |
| Cow position: | chr11:1489702-1489413 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 120, 32 |
| Conread position: | 238-533 |
| Cow position: | chr11:44518423-44518130 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 242-527 |
| Cow position: | chr11:49559222-49558955 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 242-573 |
| Cow position: | chr11:3855677-3856009 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 246-420 |
| Cow position: | chr11:39803654-39803830 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 251-533 |
| Cow position: | chr11:18887322-18887592 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 146, 50 |
| Conread position: | 251-540 |
| Cow position: | chr11:26547965-26548253 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 255 |
| Conread position: | 256-542 |
| Cow position: | chr11:29232550-29232267 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 164 |
| Conread position: | 258-485 |
| Cow position: | chr11:52657613-52657387 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 264-539 |
| Cow position: | chr11:57627591-57627317 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 86, 230 |
| Conread position: | 266-540 |
| Cow position: | chr11:80473798-80473523 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 80, 138 |
| Conread position: | 293-533 |
| Cow position: | chr11:44582839-44582600 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 202 |
| Conread position: | 306-573 |
| Cow position: | chr11:77254218-77253951 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 309-576 |
| Cow position: | chr11:21902582-21902309 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 110 |
| Conread position: | 312-486 |
| Cow position: | chr11:51279903-51279726 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 318-575 |
| Cow position: | chr11:44491711-44491465 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 351-534 |
| Cow position: | chr11:84390101-84390280 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 355-576 |
| Cow position: | chr11:18070633-18070410 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 133 |
| Conread position: | 358-538 |
| Cow position: | chr11:7117013-7117187 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 365-575 |
| Cow position: | chr11:22935664-22935882 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 370-540 |
| Cow position: | chr11:21930442-21930274 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 374-533 |
| Cow position: | chr11:72310455-72310299 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 119 |
Show alignments to all cow chromosomes.