Cow genome map

Conread name: Ss1.1-risp39_i19.5

Conread position: 3-176
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 107

Conread position: 168-525
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 17

Conread position: 172-540
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 348

Conread position: 185-451
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 185-564
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 49

Conread position: 185-574
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 119

Conread position: 186-310
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 186-391
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 166, 0

Conread position: 186-391
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 166, 0

Conread position: 186-457
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 164, 50

Conread position: 186-503
Cow position:
Alignm length: 323
Alignm identity: 232
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 13, 24

Conread position: 186-525
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 327

Conread position: 186-525
Cow position:
Alignm length: 345
Alignm identity: 237
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 166, 310

Conread position: 186-532
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 50

Conread position: 186-533
Cow position:
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 61

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 231

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 320

Conread position: 186-533
Cow position:
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 50

Conread position: 186-533
Cow position:
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 108

Conread position: 186-538
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 157, 292

Conread position: 186-538
Cow position:
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 16

Conread position: 186-539
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 188

Conread position: 186-540
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 257

Conread position: 186-540
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 166, 75

Conread position: 186-573
Cow position:
Alignm length: 418
Alignm identity: 281
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 166, 196

Conread position: 186-574
Cow position:
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 186-574
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 89

Conread position: 186-574
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 24

Conread position: 186-574
Cow position:
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 309

Conread position: 186-575
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 163, 135

Conread position: 188-486
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 164, 0

Conread position: 191-503
Cow position:
Alignm length: 316
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 45

Conread position: 191-533
Cow position:
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 192

Conread position: 192-441
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 128

Conread position: 192-533
Cow position:
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 66

Conread position: 192-534
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 78

Conread position: 192-538
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 129

Conread position: 192-540
Cow position:
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 173

Conread position: 196-539
Cow position:
Alignm length: 350
Alignm identity: 220
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 126

Conread position: 199-412
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 11

Conread position: 201-533
Cow position:
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 289

Conread position: 201-534
Cow position:
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 305

Conread position: 208-520
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 188, 28

Conread position: 224-468
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 49

Conread position: 227-476
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 61

Conread position: 251-540
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 21

Conread position: 269-533
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 226

Conread position: 271-486
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 143

Conread position: 288-574
Cow position:
Alignm length: 296
Alignm identity: 193
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 140

Conread position: 301-489
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 16

Conread position: 314-575
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 32

Conread position: 335-538
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 120

Conread position: 352-540
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 15

Conread position: 357-566
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 56

Show alignments to all cow chromosomes.