Cow genome map
Conread name: | Ss1.1-risp39_i19.5 |
Conread position: | 138-531 |
Cow position: | chr13:15450713-15450329 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 203 |
Conread position: | 168-342 |
Cow position: | chr13:35030980-35031151 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 168-533 |
Cow position: | chr13:42218483-42218109 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 260 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 168-540 |
Cow position: | chr13:2388373-2388004 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 168-540 |
Cow position: | chr13:3056694-3056321 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 168-540 |
Cow position: | chr13:21839758-21839387 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 17 |
Conread position: | 184-344 |
Cow position: | chr13:27921635-27921474 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 117 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 185-532 |
Cow position: | chr13:60700211-60699857 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 331 |
Conread position: | 186-309 |
Cow position: | chr13:30656525-30656401 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 186-330 |
Cow position: | chr13:35757704-35757848 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 186-351 |
Cow position: | chr13:22184804-22184642 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 186-358 |
Cow position: | chr13:31733629-31733455 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 186-486 |
Cow position: | chr13:677477-677777 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 75 |
Conread position: | 186-486 |
Cow position: | chr13:30244223-30243921 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 264 |
Conread position: | 186-488 |
Cow position: | chr13:58263229-58263531 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 204 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 82, 16 |
Conread position: | 186-500 |
Cow position: | chr13:23002847-23002523 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 65 |
Conread position: | 186-503 |
Cow position: | chr13:34910410-34910091 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 264 |
Conread position: | 186-505 |
Cow position: | chr13:30238700-30239016 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 102 |
Conread position: | 186-531 |
Cow position: | chr13:1592694-1592353 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 178 |
Conread position: | 186-532 |
Cow position: | chr13:15520049-15519704 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 320 |
Conread position: | 186-532 |
Cow position: | chr13:58118452-58118107 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 309 |
Conread position: | 186-533 |
Cow position: | chr13:3653862-3653516 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 320 |
Conread position: | 186-533 |
Cow position: | chr13:6667660-6667330 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 92 |
Conread position: | 186-533 |
Cow position: | chr13:9045243-9045572 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 50 |
Conread position: | 186-533 |
Cow position: | chr13:13900327-13900672 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 118 |
Conread position: | 186-533 |
Cow position: | chr13:15923921-15923576 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 30 |
Conread position: | 186-533 |
Cow position: | chr13:30303741-30304087 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 317 |
Conread position: | 186-533 |
Cow position: | chr13:31611844-31611503 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 49 |
Conread position: | 186-533 |
Cow position: | chr13:32737366-32737020 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 310 |
Conread position: | 186-533 |
Cow position: | chr13:34029872-34030214 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 90 |
Conread position: | 186-533 |
Cow position: | chr13:50109909-50110254 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 275 |
Conread position: | 186-533 |
Cow position: | chr13:60466786-60467130 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 148 |
Conread position: | 186-539 |
Cow position: | chr13:4941847-4942194 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 159 |
Conread position: | 186-540 |
Cow position: | chr13:5625536-5625192 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 210, 53 |
Conread position: | 186-540 |
Cow position: | chr13:6758440-6758780 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 245 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 67, 46 |
Conread position: | 186-540 |
Cow position: | chr13:16254922-16254573 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 102 |
Conread position: | 186-540 |
Cow position: | chr13:32984893-32984540 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 308 |
Conread position: | 186-540 |
Cow position: | chr13:34424219-34424573 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 309 |
Conread position: | 186-540 |
Cow position: | chr13:34937939-34938275 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 95 |
Conread position: | 186-540 |
Cow position: | chr13:46101796-46102141 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 232 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 157, 117 |
Conread position: | 186-571 |
Cow position: | chr13:47229545-47229162 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 76 |
Conread position: | 186-573 |
Cow position: | chr13:20541580-20541196 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 67 |
Conread position: | 186-574 |
Cow position: | chr13:17308930-17309329 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 309 |
Conread position: | 186-575 |
Cow position: | chr13:25692153-25692540 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 102 |
Conread position: | 186-575 |
Cow position: | chr13:43982626-43982239 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 54 |
Conread position: | 187-533 |
Cow position: | chr13:34325101-34324755 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 196 |
Conread position: | 187-533 |
Cow position: | chr13:49974135-49974480 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 298 |
Conread position: | 191-532 |
Cow position: | chr13:33335847-33335511 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 102 |
Conread position: | 191-540 |
Cow position: | chr13:32545844-32546191 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 63 |
Conread position: | 192-500 |
Cow position: | chr13:19413950-19414240 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 218 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 201, 28 |
Conread position: | 192-533 |
Cow position: | chr13:57024165-57024501 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 53 |
Conread position: | 194-468 |
Cow position: | chr13:31730407-31730132 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 23 |
Conread position: | 194-468 |
Cow position: | chr13:41696330-41696604 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 189 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 39, 44 |
Conread position: | 194-540 |
Cow position: | chr13:14178369-14178028 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 237 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 48, 112 |
Conread position: | 201-533 |
Cow position: | chr13:4484270-4484597 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 186 |
Conread position: | 202-500 |
Cow position: | chr13:34765972-34765684 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 37 |
Conread position: | 202-533 |
Cow position: | chr13:28670786-28670459 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 65 |
Conread position: | 203-540 |
Cow position: | chr13:5628334-5628005 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 229 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 39, 48 |
Conread position: | 207-540 |
Cow position: | chr13:30278102-30278427 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 224 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 143, 89 |
Conread position: | 207-575 |
Cow position: | chr13:26844516-26844873 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 66 |
Conread position: | 208-574 |
Cow position: | chr13:52646396-52646018 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 287 |
Conread position: | 215-533 |
Cow position: | chr13:34041847-34041533 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 247 |
Conread position: | 243-437 |
Cow position: | chr13:48358223-48358419 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 153 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 109, 16 |
Conread position: | 259-532 |
Cow position: | chr13:15543072-15543343 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 175 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 94, 117 |
Conread position: | 280-540 |
Cow position: | chr13:47567769-47568025 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 174 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 173 |
Conread position: | 283-575 |
Cow position: | chr13:17331207-17330903 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 211 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 67, 34 |
Conread position: | 291-574 |
Cow position: | chr13:11798148-11797862 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 205 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 55, 181 |
Conread position: | 298-485 |
Cow position: | chr13:38669950-38670138 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 136 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 68, 35 |
Conread position: | 308-540 |
Cow position: | chr13:35757852-35758083 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 174 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 44, 187 |
Conread position: | 309-571 |
Cow position: | chr13:34049319-34049581 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 183 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 29, 17 |
Conread position: | 320-573 |
Cow position: | chr13:30654789-30654523 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 321-540 |
Cow position: | chr13:21696844-21697066 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 174 |
Conread position: | 321-575 |
Cow position: | chr13:34154164-34153903 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 188 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 76, 24 |
Conread position: | 399-574 |
Cow position: | chr13:14402424-14402240 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 129, 104 |
Conread position: | 400-533 |
Cow position: | chr13:43590006-43590135 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 107 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.