Cow genome map
| Conread name: | Ss1.1-risp39_i19.5 |
| Conread position: | 168-505 |
| Cow position: | chr15:1518835-1518498 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-533 |
| Cow position: | chr15:4142500-4142138 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-533 |
| Cow position: | chr15:18577034-18577391 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 13 |
| Conread position: | 168-536 |
| Cow position: | chr15:3009534-3009159 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 185-534 |
| Cow position: | chr15:17079872-17079519 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 171 |
| Conread position: | 185-540 |
| Cow position: | chr15:10888951-10889300 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 62 |
| Conread position: | 185-574 |
| Cow position: | chr15:32720408-32720010 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 186-299 |
| Cow position: | chr15:1882172-1882059 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-320 |
| Cow position: | chr15:38981004-38981138 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-331 |
| Cow position: | chr15:3842123-3841977 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 95, 123 |
| Conread position: | 186-344 |
| Cow position: | chr15:2012386-2012541 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 186-344 |
| Cow position: | chr15:32711427-32711585 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-351 |
| Cow position: | chr15:35735913-35736078 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-356 |
| Cow position: | chr15:1764426-1764593 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 166, 23 |
| Conread position: | 186-384 |
| Cow position: | chr15:31862228-31862028 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 186-391 |
| Cow position: | chr15:36971251-36971458 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 186-420 |
| Cow position: | chr15:37392829-37393063 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 98, 122 |
| Conread position: | 186-421 |
| Cow position: | chr15:32516129-32515898 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 186-445 |
| Cow position: | chr15:56815-57081 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 186-461 |
| Cow position: | chr15:1782557-1782835 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 186-461 |
| Cow position: | chr15:7934664-7934941 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 186-461 |
| Cow position: | chr15:18267653-18267375 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 186-461 |
| Cow position: | chr15:50147401-50147678 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 166, 173 |
| Conread position: | 186-485 |
| Cow position: | chr15:6067840-6067546 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 160, 128 |
| Conread position: | 186-486 |
| Cow position: | chr15:4812934-4813236 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 173 |
| Conread position: | 186-490 |
| Cow position: | chr15:4685933-4686238 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 88 |
| Conread position: | 186-505 |
| Cow position: | chr15:8099811-8100126 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 42 |
| Conread position: | 186-524 |
| Cow position: | chr15:1238016-1238349 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 58 |
| Conread position: | 186-524 |
| Cow position: | chr15:1834136-1833782 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 166, 112 |
| Conread position: | 186-525 |
| Cow position: | chr15:4765511-4765849 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 309 |
| Conread position: | 186-525 |
| Cow position: | chr15:9913023-9913365 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 246 |
| Conread position: | 186-528 |
| Cow position: | chr15:4961972-4962309 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 141 |
| Conread position: | 186-531 |
| Cow position: | chr15:4922485-4922827 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 91 |
| Conread position: | 186-532 |
| Cow position: | chr15:44070263-44070606 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 46 |
| Conread position: | 186-532 |
| Cow position: | chr15:53136886-53136541 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-533 |
| Cow position: | chr15:2076984-2077338 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 315 |
| Conread position: | 186-533 |
| Cow position: | chr15:2801609-2801262 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 81, 229 |
| Conread position: | 186-533 |
| Cow position: | chr15:4386094-4386440 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-533 |
| Cow position: | chr15:4651699-4652032 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 186-533 |
| Cow position: | chr15:4671768-4672115 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 321 |
| Conread position: | 186-533 |
| Cow position: | chr15:6155609-6155263 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 320 |
| Conread position: | 186-533 |
| Cow position: | chr15:7260933-7261290 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 166, 53 |
| Conread position: | 186-533 |
| Cow position: | chr15:8057632-8057967 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 62 |
| Conread position: | 186-533 |
| Cow position: | chr15:9739033-9738707 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 164, 78 |
| Conread position: | 186-533 |
| Cow position: | chr15:11626029-11626369 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 166, 20 |
| Conread position: | 186-533 |
| Cow position: | chr15:14582024-14581681 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 101 |
| Conread position: | 186-533 |
| Cow position: | chr15:18332492-18332149 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 134 |
| Conread position: | 186-533 |
| Cow position: | chr15:28489814-28489468 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 304 |
| Conread position: | 186-533 |
| Cow position: | chr15:32494050-32493707 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 179 |
| Conread position: | 186-533 |
| Cow position: | chr15:35647333-35646992 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 189 |
| Conread position: | 186-533 |
| Cow position: | chr15:35752981-35752638 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 49 |
| Conread position: | 186-533 |
| Cow position: | chr15:36625935-36625591 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 53 |
| Conread position: | 186-534 |
| Cow position: | chr15:6471585-6471246 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 186-535 |
| Cow position: | chr15:19737716-19737367 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 310 |
| Conread position: | 186-540 |
| Cow position: | chr15:444939-445294 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 310 |
| Conread position: | 186-540 |
| Cow position: | chr15:524523-524169 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 117 |
| Conread position: | 186-540 |
| Cow position: | chr15:2763010-2763347 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 174, 61 |
| Conread position: | 186-540 |
| Cow position: | chr15:3889213-3889565 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 176 |
| Conread position: | 186-540 |
| Cow position: | chr15:4196796-4197153 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-540 |
| Cow position: | chr15:6553487-6553147 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 178 |
| Conread position: | 186-540 |
| Cow position: | chr15:7837583-7837937 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 321 |
| Conread position: | 186-540 |
| Cow position: | chr15:13674850-13675190 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 186-540 |
| Cow position: | chr15:32693904-32694252 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 53 |
| Conread position: | 186-540 |
| Cow position: | chr15:44829134-44829488 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 321 |
| Conread position: | 186-541 |
| Cow position: | chr15:2214565-2214205 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 257 |
| Conread position: | 186-541 |
| Cow position: | chr15:9003785-9003432 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 35 |
| Conread position: | 186-545 |
| Cow position: | chr15:14635896-14636260 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 186-548 |
| Cow position: | chr15:3260984-3260621 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-571 |
| Cow position: | chr15:579775-580157 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 146 |
| Conread position: | 186-571 |
| Cow position: | chr15:15346780-15346396 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 100 |
| Conread position: | 186-571 |
| Cow position: | chr15:50123608-50123218 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 186-573 |
| Cow position: | chr15:5980683-5981079 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 186-574 |
| Cow position: | chr15:1772832-1773232 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 102 |
| Conread position: | 186-574 |
| Cow position: | chr15:2647320-2646921 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 47 |
| Conread position: | 186-574 |
| Cow position: | chr15:6592283-6591881 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 145 |
| Conread position: | 186-574 |
| Cow position: | chr15:7545213-7545599 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 267, 24 |
| Conread position: | 186-574 |
| Cow position: | chr15:11597673-11597274 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 275 |
| Conread position: | 186-574 |
| Cow position: | chr15:51217938-51218333 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-575 |
| Cow position: | chr15:2016904-2017304 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 30 |
| Conread position: | 186-575 |
| Cow position: | chr15:6079086-6079488 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 187-445 |
| Cow position: | chr15:368837-368571 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 187-538 |
| Cow position: | chr15:7234605-7234942 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 208, 50 |
| Conread position: | 187-538 |
| Cow position: | chr15:8750744-8751087 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 47 |
| Conread position: | 187-574 |
| Cow position: | chr15:20749725-20750124 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 308 |
| Conread position: | 188-373 |
| Cow position: | chr15:7893896-7893717 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 188-573 |
| Cow position: | chr15:47772487-47772874 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 189-461 |
| Cow position: | chr15:2589151-2588876 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 163, 19 |
| Conread position: | 191-532 |
| Cow position: | chr15:315516-315180 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 141 |
| Conread position: | 192-389 |
| Cow position: | chr15:24717428-24717626 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 158, 140 |
| Conread position: | 192-533 |
| Cow position: | chr15:9430281-9430612 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 192-533 |
| Cow position: | chr15:24295440-24295778 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 27 |
| Conread position: | 192-539 |
| Cow position: | chr15:21450004-21450355 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 76 |
| Conread position: | 192-570 |
| Cow position: | chr15:21665405-21665028 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 127 |
| Conread position: | 192-571 |
| Cow position: | chr15:17217920-17217543 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 303 |
| Conread position: | 192-575 |
| Cow position: | chr15:31784450-31784058 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 193-302 |
| Cow position: | chr15:21607260-21607369 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-531 |
| Cow position: | chr15:8811683-8811347 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 263 |
| Conread position: | 194-533 |
| Cow position: | chr15:31359225-31359557 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 175 |
| Conread position: | 197-469 |
| Cow position: | chr15:328758-329040 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 155, 12 |
| Conread position: | 200-391 |
| Cow position: | chr15:19818314-19818507 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 201-349 |
| Cow position: | chr15:7055384-7055532 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 201-479 |
| Cow position: | chr15:1300455-1300177 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 87 |
| Conread position: | 201-530 |
| Cow position: | chr15:20356567-20356245 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 194, 131 |
| Conread position: | 201-533 |
| Cow position: | chr15:32480234-32479915 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 145, 57 |
| Conread position: | 201-575 |
| Cow position: | chr15:36668088-36668483 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 202-468 |
| Cow position: | chr15:6368605-6368339 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 150, 81 |
| Conread position: | 203-353 |
| Cow position: | chr15:7983671-7983524 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 203-540 |
| Cow position: | chr15:1668080-1668402 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 147, 36 |
| Conread position: | 203-574 |
| Cow position: | chr15:1658362-1657993 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 147, 36 |
| Conread position: | 204-535 |
| Cow position: | chr15:13074358-13074689 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 204-575 |
| Cow position: | chr15:5952949-5952581 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 207-533 |
| Cow position: | chr15:1317797-1318125 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 168 |
| Conread position: | 212-576 |
| Cow position: | chr15:2925669-2926044 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 216-358 |
| Cow position: | chr15:51610483-51610628 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 23 |
| Conread position: | 220-488 |
| Cow position: | chr15:7965579-7965308 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 239-575 |
| Cow position: | chr15:28986645-28986307 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 156, 139 |
| Conread position: | 252-436 |
| Cow position: | chr15:17293478-17293664 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 97, 80 |
| Conread position: | 256-553 |
| Cow position: | chr15:51715336-51715635 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 257-573 |
| Cow position: | chr15:51675126-51675449 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 270-489 |
| Cow position: | chr15:53313185-53313402 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 112 |
| Conread position: | 271-574 |
| Cow position: | chr15:6485007-6485317 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 274-533 |
| Cow position: | chr15:17148550-17148800 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 71, 200 |
| Conread position: | 277-574 |
| Cow position: | chr15:32204046-32204339 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 76, 7 |
| Conread position: | 293-533 |
| Cow position: | chr15:6623659-6623892 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 294-540 |
| Cow position: | chr15:2902030-2901789 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 308-533 |
| Cow position: | chr15:22378360-22378584 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 187 |
| Conread position: | 308-540 |
| Cow position: | chr15:43757035-43757270 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 187 |
| Conread position: | 310-571 |
| Cow position: | chr15:13391610-13391349 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 179 |
| Conread position: | 315-570 |
| Cow position: | chr15:4822942-4823206 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 136 |
| Conread position: | 317-521 |
| Cow position: | chr15:21948782-21948579 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 178 |
| Conread position: | 347-575 |
| Cow position: | chr15:35736286-35736523 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 352-533 |
| Cow position: | chr15:32711727-32711904 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 352-570 |
| Cow position: | chr15:1764829-1765040 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 175, 27 |
| Conread position: | 367-531 |
| Cow position: | chr15:16595347-16595508 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 369-540 |
| Cow position: | chr15:38981244-38981412 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 419-570 |
| Cow position: | chr15:40107612-40107762 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 89 |
Show alignments to all cow chromosomes.