Cow genome map
Conread name: | Ss1.1-risp39_i19.5 |
Conread position: | 168-486 |
Cow position: | chr18:51462327-51462014 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 221 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 168-538 |
Cow position: | chr18:11274350-11273985 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 185-533 |
Cow position: | chr18:19353143-19353477 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 241 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 210, 7 |
Conread position: | 186-344 |
Cow position: | chr18:24039953-24039795 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 186-437 |
Cow position: | chr18:40725887-40725628 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 190 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 186-454 |
Cow position: | chr18:55088148-55087882 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 190 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 164, 203 |
Conread position: | 186-468 |
Cow position: | chr18:33336644-33336924 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 232 |
Conread position: | 186-486 |
Cow position: | chr18:25351528-25351831 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 0 |
Conread position: | 186-503 |
Cow position: | chr18:54023363-54023042 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 20 |
Conread position: | 186-525 |
Cow position: | chr18:33750785-33751120 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 186-533 |
Cow position: | chr18:14131165-14131511 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 309 |
Conread position: | 186-533 |
Cow position: | chr18:16079443-16079785 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 97 |
Conread position: | 186-533 |
Cow position: | chr18:16088919-16089254 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 49 |
Conread position: | 186-533 |
Cow position: | chr18:16175842-16175498 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 118 |
Conread position: | 186-533 |
Cow position: | chr18:27837536-27837192 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 91 |
Conread position: | 186-533 |
Cow position: | chr18:28973112-28972766 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 309 |
Conread position: | 186-533 |
Cow position: | chr18:32652989-32653335 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 320 |
Conread position: | 186-533 |
Cow position: | chr18:33952808-33952463 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 176 |
Conread position: | 186-533 |
Cow position: | chr18:36509111-36509460 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 323 |
Conread position: | 186-533 |
Cow position: | chr18:40479161-40479506 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 319 |
Conread position: | 186-533 |
Cow position: | chr18:41840036-41839690 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 310 |
Conread position: | 186-534 |
Cow position: | chr18:33269597-33269940 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 108 |
Conread position: | 186-540 |
Cow position: | chr18:29237708-29238029 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 50 |
Conread position: | 186-540 |
Cow position: | chr18:51661114-51661470 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 62 |
Conread position: | 186-540 |
Cow position: | chr18:52651689-52652037 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 40 |
Conread position: | 186-540 |
Cow position: | chr18:54170759-54170410 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 101 |
Conread position: | 186-571 |
Cow position: | chr18:51342458-51342840 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 141 |
Conread position: | 186-574 |
Cow position: | chr18:14416757-14417151 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 320 |
Conread position: | 186-574 |
Cow position: | chr18:37506733-37507129 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 309 |
Conread position: | 186-575 |
Cow position: | chr18:51239070-51239459 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 255 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 321, 124 |
Conread position: | 186-576 |
Cow position: | chr18:51275264-51274872 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 215, 96 |
Conread position: | 187-529 |
Cow position: | chr18:16869187-16869533 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 245 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 21, 48 |
Conread position: | 187-575 |
Cow position: | chr18:36256124-36255740 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 274 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 34, 140 |
Conread position: | 191-533 |
Cow position: | chr18:23798425-23798767 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 305 |
Conread position: | 193-533 |
Cow position: | chr18:32768438-32768775 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 83 |
Conread position: | 201-468 |
Cow position: | chr18:29073789-29074051 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 194 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 62, 81 |
Conread position: | 201-574 |
Cow position: | chr18:51481674-51482051 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 186 |
Conread position: | 203-505 |
Cow position: | chr18:4946849-4947148 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 36 |
Conread position: | 206-575 |
Cow position: | chr18:54271293-54271665 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 126 |
Conread position: | 226-491 |
Cow position: | chr18:29047133-29046873 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 180 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 170, 130 |
Conread position: | 231-540 |
Cow position: | chr18:27988008-27988316 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 264 |
Conread position: | 239-384 |
Cow position: | chr18:17673783-17673638 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 104, 38 |
Conread position: | 261-528 |
Cow position: | chr18:25364051-25364318 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 182 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 69, 234 |
Conread position: | 266-483 |
Cow position: | chr18:2475311-2475097 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 143 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 297-574 |
Cow position: | chr18:47742387-47742674 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 193 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 82, 133 |
Conread position: | 300-571 |
Cow position: | chr18:54005285-54005018 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 181 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 54, 75 |
Conread position: | 307-533 |
Cow position: | chr18:15856136-15856357 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 6, 65 |
Conread position: | 368-574 |
Cow position: | chr18:15821858-15821658 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 29, 5 |
Show alignments to all cow chromosomes.