Cow genome map

Conread name: Ss1.1-risp39_i19.5

Conread position: 140-527
Cow position:
Alignm length: 407
Alignm identity: 267
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 18

Conread position: 160-540
Cow position:
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 217

Conread position: 168-344
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 168-540
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 17

Conread position: 168-574
Cow position:
Alignm length: 425
Alignm identity: 279
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 184, 17

Conread position: 186-330
Cow position:
Alignm length: 145
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 186-333
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 186-339
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 186-358
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 166, 0

Conread position: 186-360
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 166, 0

Conread position: 186-370
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 164, 62

Conread position: 186-436
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 164, 55

Conread position: 186-461
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 17, 123

Conread position: 186-462
Cow position:
Alignm length: 286
Alignm identity: 209
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 15, 24

Conread position: 186-466
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 98

Conread position: 186-486
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 180, 174

Conread position: 186-486
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 152, 23

Conread position: 186-525
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 311

Conread position: 186-529
Cow position:
Alignm length: 346
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 146

Conread position: 186-532
Cow position:
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 186-532
Cow position:
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 98

Conread position: 186-532
Cow position:
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 119

Conread position: 186-533
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 82, 330

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 106

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 308

Conread position: 186-533
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 201

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 308

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 320

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 320

Conread position: 186-534
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 79

Conread position: 186-535
Cow position:
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 307

Conread position: 186-539
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 201

Conread position: 186-540
Cow position:
Alignm length: 364
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 208, 159

Conread position: 186-540
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 150

Conread position: 186-541
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 53

Conread position: 186-569
Cow position:
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 101

Conread position: 186-571
Cow position:
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 300

Conread position: 186-574
Cow position:
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 310

Conread position: 186-574
Cow position:
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 45

Conread position: 186-574
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 308

Conread position: 186-574
Cow position:
Alignm length: 420
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 323

Conread position: 187-461
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 165, 0

Conread position: 187-533
Cow position:
Alignm length: 352
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 127, 50

Conread position: 190-571
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 12

Conread position: 191-404
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 158, 204

Conread position: 192-329
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 192-458
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 164

Conread position: 194-533
Cow position:
Alignm length: 341
Alignm identity: 219
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 203, 41

Conread position: 202-469
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 33

Conread position: 203-466
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 149, 258

Conread position: 203-476
Cow position:
Alignm length: 277
Alignm identity: 204
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 36

Conread position: 203-540
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 279

Conread position: 203-574
Cow position:
Alignm length: 398
Alignm identity: 269
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 143, 115

Conread position: 218-517
Cow position:
Alignm length: 302
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 46

Conread position: 266-575
Cow position:
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 227

Conread position: 289-539
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 206

Conread position: 310-575
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 137

Conread position: 313-533
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 43, 50

Conread position: 314-540
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 38, 202

Conread position: 347-523
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 24

Conread position: 351-533
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 135

Conread position: 363-520
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 97

Conread position: 363-575
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 152

Show alignments to all cow chromosomes.