Cow genome map

Conread name: Ss1.1-risp39_i19.5

Conread position: 82-473
Cow position:
Alignm length: 395
Alignm identity: 253
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 14

Conread position: 140-490
Cow position:
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 168-360
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 184, 17

Conread position: 168-540
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 17

Conread position: 168-575
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 23

Conread position: 171-533
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 62

Conread position: 185-484
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 126, 0

Conread position: 185-532
Cow position:
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 50

Conread position: 186-309
Cow position:
Alignm length: 125
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 186-314
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 186-358
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 160, 91

Conread position: 186-420
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 210, 22

Conread position: 186-463
Cow position:
Alignm length: 284
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 117, 35

Conread position: 186-468
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 164, 98

Conread position: 186-480
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 209, 147

Conread position: 186-489
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 179

Conread position: 186-490
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 65

Conread position: 186-528
Cow position:
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 24

Conread position: 186-531
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 125

Conread position: 186-533
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 59

Conread position: 186-533
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 151

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 178

Conread position: 186-533
Cow position:
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 61

Conread position: 186-533
Cow position:
Alignm length: 352
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 310

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 322

Conread position: 186-533
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 317

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 50

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 118

Conread position: 186-537
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 209, 182

Conread position: 186-538
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 178

Conread position: 186-540
Cow position:
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 196

Conread position: 186-540
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 63

Conread position: 186-540
Cow position:
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 309

Conread position: 186-555
Cow position:
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 20

Conread position: 186-569
Cow position:
Alignm length: 397
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 25

Conread position: 186-570
Cow position:
Alignm length: 388
Alignm identity: 261
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 209, 160

Conread position: 186-574
Cow position:
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 78

Conread position: 186-574
Cow position:
Alignm length: 403
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 38

Conread position: 186-574
Cow position:
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 117

Conread position: 186-574
Cow position:
Alignm length: 415
Alignm identity: 281
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 62

Conread position: 186-574
Cow position:
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 23

Conread position: 186-574
Cow position:
Alignm length: 401
Alignm identity: 268
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 71, 28

Conread position: 186-574
Cow position:
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 178

Conread position: 186-574
Cow position:
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 262

Conread position: 186-575
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 61

Conread position: 189-505
Cow position:
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 50

Conread position: 191-538
Cow position:
Alignm length: 349
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 341, 152

Conread position: 192-533
Cow position:
Alignm length: 346
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 76

Conread position: 201-540
Cow position:
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 213

Conread position: 203-574
Cow position:
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 73

Conread position: 216-575
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 11

Conread position: 221-344
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 221-575
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 180, 63

Conread position: 224-533
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 205

Conread position: 237-531
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 105

Conread position: 238-574
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 332

Conread position: 242-573
Cow position:
Alignm length: 345
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 110, 50

Conread position: 252-575
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 104, 82

Conread position: 253-530
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 96, 116

Conread position: 255-527
Cow position:
Alignm length: 276
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 133

Conread position: 255-540
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 14

Conread position: 285-569
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 112, 39

Conread position: 294-533
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 71

Conread position: 294-575
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 47, 9

Conread position: 317-540
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 14

Conread position: 319-540
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 178

Conread position: 320-575
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 133

Conread position: 321-533
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 141

Conread position: 361-570
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 140

Conread position: 396-570
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 0

Show alignments to all cow chromosomes.