Cow genome map

Conread name: Ss1.1-risp39_i19.5

Conread position: 168-344
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 168-450
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 184, 17

Conread position: 168-540
Cow position:
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 17

Conread position: 168-574
Cow position:
Alignm length: 428
Alignm identity: 290
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 184, 17

Conread position: 174-533
Cow position:
Alignm length: 365
Alignm identity: 243
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 89

Conread position: 185-480
Cow position:
Alignm length: 299
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 103

Conread position: 185-533
Cow position:
Alignm length: 352
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 46

Conread position: 185-571
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 178

Conread position: 186-325
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 186-350
Cow position:
Alignm length: 165
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 186-436
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 91, 122

Conread position: 186-486
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 186-494
Cow position:
Alignm length: 315
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 132

Conread position: 186-525
Cow position:
Alignm length: 341
Alignm identity: 216
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 211, 129

Conread position: 186-527
Cow position:
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 50

Conread position: 186-530
Cow position:
Alignm length: 348
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 71

Conread position: 186-531
Cow position:
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 22

Conread position: 186-533
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 293

Conread position: 186-533
Cow position:
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 103

Conread position: 186-533
Cow position:
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 178

Conread position: 186-533
Cow position:
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 23

Conread position: 186-533
Cow position:
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 61

Conread position: 186-533
Cow position:
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 313

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 98

Conread position: 186-536
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 157, 53

Conread position: 186-540
Cow position:
Alignm length: 361
Alignm identity: 250
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 183

Conread position: 186-540
Cow position:
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 7

Conread position: 186-540
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 310

Conread position: 186-540
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 166, 61

Conread position: 186-540
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 94

Conread position: 186-541
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 118

Conread position: 186-559
Cow position:
Alignm length: 388
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 132

Conread position: 186-570
Cow position:
Alignm length: 393
Alignm identity: 273
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 211, 69

Conread position: 186-571
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 169

Conread position: 186-571
Cow position:
Alignm length: 400
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 186

Conread position: 186-572
Cow position:
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 20

Conread position: 186-573
Cow position:
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 211

Conread position: 186-573
Cow position:
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 143

Conread position: 186-574
Cow position:
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 45

Conread position: 186-574
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 318

Conread position: 186-574
Cow position:
Alignm length: 401
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 199

Conread position: 186-574
Cow position:
Alignm length: 401
Alignm identity: 272
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 231

Conread position: 186-575
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 73

Conread position: 186-576
Cow position:
Alignm length: 408
Alignm identity: 282
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 166, 231

Conread position: 187-569
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 59, 32

Conread position: 188-467
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 181, 281

Conread position: 188-472
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 148

Conread position: 191-533
Cow position:
Alignm length: 346
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 304

Conread position: 191-555
Cow position:
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 304

Conread position: 192-532
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 45

Conread position: 192-533
Cow position:
Alignm length: 345
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 230

Conread position: 192-534
Cow position:
Alignm length: 350
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 192-575
Cow position:
Alignm length: 392
Alignm identity: 257
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 79, 112

Conread position: 193-533
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 298

Conread position: 201-468
Cow position:
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 22

Conread position: 201-533
Cow position:
Alignm length: 336
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 149, 38

Conread position: 203-574
Cow position:
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 292

Conread position: 204-473
Cow position:
Alignm length: 273
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 0

Conread position: 208-538
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 79

Conread position: 210-540
Cow position:
Alignm length: 345
Alignm identity: 234
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 27

Conread position: 221-523
Cow position:
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 285

Conread position: 226-532
Cow position:
Alignm length: 309
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 95

Conread position: 234-541
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 242-531
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 252

Conread position: 250-539
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 96, 181

Conread position: 251-539
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 101, 119

Conread position: 264-533
Cow position:
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 139, 83

Conread position: 271-486
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 79, 18

Conread position: 277-535
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 66, 211

Conread position: 282-575
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 108

Conread position: 321-535
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 196

Conread position: 332-532
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 81

Conread position: 332-534
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 131

Conread position: 339-575
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 149, 56

Conread position: 351-540
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 46, 142

Conread position: 357-540
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 135

Show alignments to all cow chromosomes.