Cow genome map
| Conread name: | Ss1.1-risp39_i19.5 |
| Conread position: | 106-540 |
| Cow position: | chr26:2199289-2199721 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 168-419 |
| Cow position: | chr26:3030102-3029850 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-533 |
| Cow position: | chr26:4604456-4604095 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 23 |
| Conread position: | 168-533 |
| Cow position: | chr26:19350786-19350432 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 22 |
| Conread position: | 168-574 |
| Cow position: | chr26:8919559-8919973 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 184-533 |
| Cow position: | chr26:21825946-21825603 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 185-571 |
| Cow position: | chr26:17396171-17395788 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 321 |
| Conread position: | 186-437 |
| Cow position: | chr26:5675874-5676125 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 163, 49 |
| Conread position: | 186-468 |
| Cow position: | chr26:4333556-4333274 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 186-525 |
| Cow position: | chr26:2351620-2351281 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 166, 94 |
| Conread position: | 186-527 |
| Cow position: | chr26:30588624-30588289 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 65 |
| Conread position: | 186-533 |
| Cow position: | chr26:6848701-6848355 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-533 |
| Cow position: | chr26:8870617-8870962 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 180 |
| Conread position: | 186-533 |
| Cow position: | chr26:9844153-9843819 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 186-533 |
| Cow position: | chr26:14894686-14895028 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 186-533 |
| Cow position: | chr26:30783485-30783843 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 320 |
| Conread position: | 186-539 |
| Cow position: | chr26:12587823-12587472 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 48 |
| Conread position: | 186-574 |
| Cow position: | chr26:1087709-1087302 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 203 |
| Conread position: | 186-574 |
| Cow position: | chr26:15144018-15143619 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 186-574 |
| Cow position: | chr26:18852962-18853362 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 192-437 |
| Cow position: | chr26:17995854-17995611 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 192-533 |
| Cow position: | chr26:2274765-2274433 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 203, 188 |
| Conread position: | 193-467 |
| Cow position: | chr26:16857355-16857083 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 200, 161 |
| Conread position: | 194-475 |
| Cow position: | chr26:26270503-26270784 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 149, 21 |
| Conread position: | 201-392 |
| Cow position: | chr26:33524002-33524192 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 140, 38 |
| Conread position: | 207-540 |
| Cow position: | chr26:1626762-1627078 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 181, 19 |
| Conread position: | 220-359 |
| Cow position: | chr26:8083616-8083751 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 284-576 |
| Cow position: | chr26:11031006-11031305 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 145 |
| Conread position: | 293-533 |
| Cow position: | chr26:9561931-9561692 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 59, 202 |
| Conread position: | 317-469 |
| Cow position: | chr26:14507687-14507532 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 332-482 |
| Cow position: | chr26:8085607-8085758 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 350-549 |
| Cow position: | chr26:20264601-20264794 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 406-572 |
| Cow position: | chr26:6806121-6805948 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.