Cow genome map
Conread name: | Ss1.1-risp39_i19.5 |
Conread position: | 168-540 |
Cow position: | chr27:16033731-16033361 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 17 |
Conread position: | 168-574 |
Cow position: | chr27:11095470-11095883 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 186-336 |
Cow position: | chr27:893893-894043 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 186-344 |
Cow position: | chr27:27752531-27752374 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 15, 24 |
Conread position: | 186-412 |
Cow position: | chr27:27663651-27663875 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 65 |
Conread position: | 186-427 |
Cow position: | chr27:21287193-21286942 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 186-468 |
Cow position: | chr27:15542008-15542293 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 34 |
Conread position: | 186-486 |
Cow position: | chr27:27506821-27507130 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 210 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 71, 112 |
Conread position: | 186-500 |
Cow position: | chr27:23725324-23725027 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 214 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 215, 83 |
Conread position: | 186-504 |
Cow position: | chr27:25804237-25803899 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 242 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 92, 23 |
Conread position: | 186-532 |
Cow position: | chr27:26554983-26554649 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 156 |
Conread position: | 186-533 |
Cow position: | chr27:1210035-1210380 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 187 |
Conread position: | 186-533 |
Cow position: | chr27:3234857-3234516 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 103 |
Conread position: | 186-533 |
Cow position: | chr27:5911547-5911893 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 309 |
Conread position: | 186-533 |
Cow position: | chr27:9330407-9330757 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 313 |
Conread position: | 186-533 |
Cow position: | chr27:15036908-15036569 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 178 |
Conread position: | 186-533 |
Cow position: | chr27:26325752-26326098 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 309 |
Conread position: | 186-533 |
Cow position: | chr27:27414556-27414903 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 249 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 199, 91 |
Conread position: | 186-533 |
Cow position: | chr27:28079123-28079459 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 40 |
Conread position: | 186-540 |
Cow position: | chr27:14459771-14459420 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 187 |
Conread position: | 186-540 |
Cow position: | chr27:28892281-28892628 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 236 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 156, 40 |
Conread position: | 186-574 |
Cow position: | chr27:30273525-30273124 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 190-463 |
Cow position: | chr27:20135378-20135098 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 195 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 192-491 |
Cow position: | chr27:22673024-22673323 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 207 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 35, 236 |
Conread position: | 193-533 |
Cow position: | chr27:15636661-15636322 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 313 |
Conread position: | 193-574 |
Cow position: | chr27:9992511-9992121 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 171 |
Conread position: | 201-540 |
Cow position: | chr27:23335859-23336191 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 75 |
Conread position: | 218-540 |
Cow position: | chr27:27195909-27195602 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 231 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 18, 49 |
Conread position: | 221-438 |
Cow position: | chr27:3643531-3643315 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 151 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 129, 161 |
Conread position: | 242-482 |
Cow position: | chr27:24215532-24215776 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 175 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 69, 42 |
Conread position: | 263-527 |
Cow position: | chr27:16551217-16551463 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 193 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 131, 71 |
Conread position: | 268-468 |
Cow position: | chr27:26036027-26035824 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 140 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 49, 40 |
Conread position: | 273-540 |
Cow position: | chr27:29854117-29854384 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 195 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 14, 38 |
Conread position: | 282-533 |
Cow position: | chr27:13898102-13898346 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 191 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 70, 96 |
Conread position: | 372-540 |
Cow position: | chr27:27752245-27752080 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 25, 132 |
Conread position: | 396-574 |
Cow position: | chr27:1677679-1677504 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 136 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 143, 95 |
Show alignments to all cow chromosomes.