Cow genome map
| Conread name: | Ss1.1-risp39_i19.5 |
| Conread position: | 7-180 |
| Cow position: | chr3:26949653-26949836 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 17-469 |
| Cow position: | chr3:22854044-22853597 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 140-505 |
| Cow position: | chr3:19944796-19945156 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 153-533 |
| Cow position: | chr3:38493802-38494185 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 168-486 |
| Cow position: | chr3:40339524-40339205 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-507 |
| Cow position: | chr3:30331897-30331556 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-533 |
| Cow position: | chr3:18860001-18860363 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-533 |
| Cow position: | chr3:46680018-46680378 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-536 |
| Cow position: | chr3:47080823-47080460 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 168-540 |
| Cow position: | chr3:3523610-3523979 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-540 |
| Cow position: | chr3:32622454-32622083 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 23 |
| Conread position: | 168-571 |
| Cow position: | chr3:45033336-45033737 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-574 |
| Cow position: | chr3:2918051-2918467 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-574 |
| Cow position: | chr3:7169797-7170204 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 17 |
| Conread position: | 168-574 |
| Cow position: | chr3:48842838-48843255 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 17 |
| Conread position: | 173-540 |
| Cow position: | chr3:46503138-46503503 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 265 |
| Conread position: | 184-504 |
| Cow position: | chr3:23213474-23213151 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 185-384 |
| Cow position: | chr3:39880219-39880413 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 191, 94 |
| Conread position: | 185-454 |
| Cow position: | chr3:78021168-78021436 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 164, 100 |
| Conread position: | 185-533 |
| Cow position: | chr3:5884147-5884494 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 326 |
| Conread position: | 186-324 |
| Cow position: | chr3:24643789-24643928 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 186-325 |
| Cow position: | chr3:24345790-24345927 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 186-326 |
| Cow position: | chr3:37625575-37625715 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-338 |
| Cow position: | chr3:24589402-24589251 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 186-357 |
| Cow position: | chr3:4028491-4028673 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 186-381 |
| Cow position: | chr3:7247281-7247479 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 186-391 |
| Cow position: | chr3:19737187-19737394 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 186-393 |
| Cow position: | chr3:56145891-56146100 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 125, 28 |
| Conread position: | 186-461 |
| Cow position: | chr3:56326530-56326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 207, 148 |
| Conread position: | 186-486 |
| Cow position: | chr3:36118268-36118570 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 118 |
| Conread position: | 186-498 |
| Cow position: | chr3:18462963-18462650 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 67 |
| Conread position: | 186-503 |
| Cow position: | chr3:7480624-7480304 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 186-523 |
| Cow position: | chr3:56339812-56339478 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 101 |
| Conread position: | 186-529 |
| Cow position: | chr3:12679238-12678893 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 300 |
| Conread position: | 186-529 |
| Cow position: | chr3:40342742-40343067 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 186-531 |
| Cow position: | chr3:64822711-64823053 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 170, 65 |
| Conread position: | 186-532 |
| Cow position: | chr3:6782977-6783313 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 166, 70 |
| Conread position: | 186-533 |
| Cow position: | chr3:2710264-2709918 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-533 |
| Cow position: | chr3:3841201-3840859 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 102 |
| Conread position: | 186-533 |
| Cow position: | chr3:10240265-10240607 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 186-533 |
| Cow position: | chr3:20381147-20381493 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 308 |
| Conread position: | 186-533 |
| Cow position: | chr3:23289729-23289384 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 75 |
| Conread position: | 186-533 |
| Cow position: | chr3:41211129-41210783 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 308 |
| Conread position: | 186-533 |
| Cow position: | chr3:45894946-45894603 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 242 |
| Conread position: | 186-533 |
| Cow position: | chr3:49136934-49136610 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 65 |
| Conread position: | 186-533 |
| Cow position: | chr3:49544602-49544260 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 186-533 |
| Cow position: | chr3:56098821-56099177 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 187 |
| Conread position: | 186-533 |
| Cow position: | chr3:63002942-63002592 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 313 |
| Conread position: | 186-533 |
| Cow position: | chr3:66620788-66621133 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 239 |
| Conread position: | 186-533 |
| Cow position: | chr3:72630680-72631024 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 194 |
| Conread position: | 186-533 |
| Cow position: | chr3:75040556-75040210 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-534 |
| Cow position: | chr3:19800571-19800225 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 70 |
| Conread position: | 186-536 |
| Cow position: | chr3:6686414-6686760 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 186-539 |
| Cow position: | chr3:50127028-50126669 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 155 |
| Conread position: | 186-540 |
| Cow position: | chr3:2869384-2869737 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-540 |
| Cow position: | chr3:7158120-7157763 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-540 |
| Cow position: | chr3:19756344-19755992 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-540 |
| Cow position: | chr3:24315073-24315431 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 310 |
| Conread position: | 186-540 |
| Cow position: | chr3:27919041-27919381 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 166, 45 |
| Conread position: | 186-540 |
| Cow position: | chr3:29330677-29330320 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 309 |
| Conread position: | 186-540 |
| Cow position: | chr3:42995068-42994710 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 186-540 |
| Cow position: | chr3:45975107-45975460 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-540 |
| Cow position: | chr3:49678407-49678756 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 108 |
| Conread position: | 186-540 |
| Cow position: | chr3:64357185-64356837 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 102 |
| Conread position: | 186-540 |
| Cow position: | chr3:64651233-64651594 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 313 |
| Conread position: | 186-541 |
| Cow position: | chr3:42052539-42052199 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 160, 177 |
| Conread position: | 186-541 |
| Cow position: | chr3:58948221-58948577 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 35 |
| Conread position: | 186-555 |
| Cow position: | chr3:30315168-30315523 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 178 |
| Conread position: | 186-555 |
| Cow position: | chr3:64016756-64016405 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 49 |
| Conread position: | 186-571 |
| Cow position: | chr3:19879259-19879640 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 186 |
| Conread position: | 186-571 |
| Cow position: | chr3:59861979-59862363 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 118 |
| Conread position: | 186-571 |
| Cow position: | chr3:66890359-66889970 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 183 |
| Conread position: | 186-572 |
| Cow position: | chr3:31419940-31420340 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 56, 186 |
| Conread position: | 186-573 |
| Cow position: | chr3:19721064-19720678 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 92 |
| Conread position: | 186-573 |
| Cow position: | chr3:29579230-29579630 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 142 |
| Conread position: | 186-574 |
| Cow position: | chr3:19939497-19939893 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 313 |
| Conread position: | 186-574 |
| Cow position: | chr3:36863854-36863458 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 102 |
| Conread position: | 186-574 |
| Cow position: | chr3:37969649-37970046 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 186-574 |
| Cow position: | chr3:50915938-50916339 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 209 |
| Conread position: | 186-574 |
| Cow position: | chr3:53516219-53516608 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 20 |
| Conread position: | 186-574 |
| Cow position: | chr3:68699359-68698966 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 204 |
| Conread position: | 186-575 |
| Cow position: | chr3:2907165-2906770 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 121 |
| Conread position: | 186-575 |
| Cow position: | chr3:49271499-49271108 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 164, 83 |
| Conread position: | 186-576 |
| Cow position: | chr3:65582663-65582282 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 164, 65 |
| Conread position: | 187-485 |
| Cow position: | chr3:6661409-6661703 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 187-489 |
| Cow position: | chr3:83232634-83232337 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 159, 49 |
| Conread position: | 187-574 |
| Cow position: | chr3:47177666-47177268 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 117 |
| Conread position: | 187-574 |
| Cow position: | chr3:68873148-68872746 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 165, 181 |
| Conread position: | 188-540 |
| Cow position: | chr3:46860695-46860344 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 312 |
| Conread position: | 188-575 |
| Cow position: | chr3:3057450-3057810 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 5 |
| Conread position: | 190-487 |
| Cow position: | chr3:69100865-69100567 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 191-484 |
| Cow position: | chr3:34845748-34846051 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 180 |
| Conread position: | 191-525 |
| Cow position: | chr3:70887744-70888082 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 161, 214 |
| Conread position: | 191-532 |
| Cow position: | chr3:18812118-18812450 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 173 |
| Conread position: | 191-533 |
| Cow position: | chr3:5953569-5953234 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 113 |
| Conread position: | 191-533 |
| Cow position: | chr3:40824001-40824339 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 173 |
| Conread position: | 192-314 |
| Cow position: | chr3:32841408-32841286 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-427 |
| Cow position: | chr3:46016376-46016611 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 81 |
| Conread position: | 192-530 |
| Cow position: | chr3:56397802-56398136 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 115, 43 |
| Conread position: | 192-531 |
| Cow position: | chr3:648888-648565 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 154, 28 |
| Conread position: | 192-533 |
| Cow position: | chr3:42447718-42448056 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 264 |
| Conread position: | 192-533 |
| Cow position: | chr3:53411795-53412118 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 203, 56 |
| Conread position: | 192-533 |
| Cow position: | chr3:78026807-78026470 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 112 |
| Conread position: | 194-533 |
| Cow position: | chr3:45773789-45773456 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 127 |
| Conread position: | 194-541 |
| Cow position: | chr3:24353534-24353863 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 46 |
| Conread position: | 201-388 |
| Cow position: | chr3:4737336-4737161 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 201-489 |
| Cow position: | chr3:43415764-43416056 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 201-505 |
| Cow position: | chr3:42432841-42433142 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 196 |
| Conread position: | 201-532 |
| Cow position: | chr3:48058735-48058407 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 227 |
| Conread position: | 201-533 |
| Cow position: | chr3:21182073-21181750 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 201-574 |
| Cow position: | chr3:63915496-63915111 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 294 |
| Conread position: | 202-488 |
| Cow position: | chr3:8238701-8238992 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 203-379 |
| Cow position: | chr3:52862098-52862274 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 137, 166 |
| Conread position: | 203-489 |
| Cow position: | chr3:46817054-46816776 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 194, 101 |
| Conread position: | 203-540 |
| Cow position: | chr3:6877545-6877218 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 26 |
| Conread position: | 203-571 |
| Cow position: | chr3:18355648-18355285 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 38 |
| Conread position: | 203-574 |
| Cow position: | chr3:4286706-4287089 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 204-534 |
| Cow position: | chr3:57484103-57483779 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 122 |
| Conread position: | 206-531 |
| Cow position: | chr3:19889973-19889655 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 146, 31 |
| Conread position: | 207-540 |
| Cow position: | chr3:79432076-79431748 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 216-533 |
| Cow position: | chr3:18541510-18541191 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 216-539 |
| Cow position: | chr3:48229836-48229525 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 87 |
| Conread position: | 221-574 |
| Cow position: | chr3:5994449-5994087 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 224-437 |
| Cow position: | chr3:57590192-57590407 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 63 |
| Conread position: | 230-526 |
| Cow position: | chr3:34030256-34029961 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 265 |
| Conread position: | 239-463 |
| Cow position: | chr3:45865470-45865243 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 242-540 |
| Cow position: | chr3:57753456-57753757 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 110, 253 |
| Conread position: | 247-538 |
| Cow position: | chr3:24445413-24445126 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 142 |
| Conread position: | 252-533 |
| Cow position: | chr3:77424309-77424585 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 253-570 |
| Cow position: | chr3:83294239-83293919 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 116 |
| Conread position: | 265-539 |
| Cow position: | chr3:34090684-34090421 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 132, 59 |
| Conread position: | 266-445 |
| Cow position: | chr3:52227213-52227395 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 267-535 |
| Cow position: | chr3:54771557-54771816 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 271-533 |
| Cow position: | chr3:30618234-30617975 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 288-533 |
| Cow position: | chr3:63200320-63200557 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 310-540 |
| Cow position: | chr3:42144134-42143904 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 184 |
| Conread position: | 317-571 |
| Cow position: | chr3:64027390-64027141 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 324-574 |
| Cow position: | chr3:13475963-13476219 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 329-574 |
| Cow position: | chr3:24346716-24346967 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 181 |
| Conread position: | 329-575 |
| Cow position: | chr3:24589019-24588773 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 177 |
| Conread position: | 338-575 |
| Cow position: | chr3:24643993-24644236 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 346-570 |
| Cow position: | chr3:15181132-15181362 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 347-576 |
| Cow position: | chr3:4028940-4029178 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 191 |
| Conread position: | 351-545 |
| Cow position: | chr3:11198783-11198593 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 353-542 |
| Cow position: | chr3:16075269-16075454 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 358-533 |
| Cow position: | chr3:36877906-36877734 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 135 |
| Conread position: | 366-468 |
| Cow position: | chr3:61492178-61492280 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 367-540 |
| Cow position: | chr3:24458377-24458207 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 125 |
| Conread position: | 373-540 |
| Cow position: | chr3:79314721-79314885 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 120 |
Show alignments to all cow chromosomes.