Cow genome map
Conread name: | Ss1.1-risp39_i19.5 |
Conread position: | 159-532 |
Cow position: | chr4:33595922-33596292 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 267 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 18, 83 |
Conread position: | 168-574 |
Cow position: | chr4:603410-603824 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 17 |
Conread position: | 168-574 |
Cow position: | chr4:17093470-17093056 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 17 |
Conread position: | 171-440 |
Cow position: | chr4:4438736-4439008 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 185 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 16, 220 |
Conread position: | 185-567 |
Cow position: | chr4:62568844-62569213 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 268 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 167, 29 |
Conread position: | 186-325 |
Cow position: | chr4:43455125-43455263 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 186-362 |
Cow position: | chr4:41958537-41958713 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 186-368 |
Cow position: | chr4:16326363-16326179 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 166, 0 |
Conread position: | 186-385 |
Cow position: | chr4:54239421-54239620 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 140 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 164, 50 |
Conread position: | 186-394 |
Cow position: | chr4:494169-493961 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 164, 84 |
Conread position: | 186-431 |
Cow position: | chr4:6268251-6268007 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 174 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 209, 160 |
Conread position: | 186-432 |
Cow position: | chr4:15195020-15195260 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 170 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 159, 53 |
Conread position: | 186-457 |
Cow position: | chr4:7331009-7331270 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 181 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 75, 51 |
Conread position: | 186-458 |
Cow position: | chr4:58689681-58689405 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 82 |
Conread position: | 186-464 |
Cow position: | chr4:61694119-61693847 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 64 |
Conread position: | 186-468 |
Cow position: | chr4:61108274-61107993 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 164, 49 |
Conread position: | 186-484 |
Cow position: | chr4:64853838-64853551 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 112 |
Conread position: | 186-486 |
Cow position: | chr4:46664933-46665230 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 108 |
Conread position: | 186-491 |
Cow position: | chr4:29531468-29531165 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 146 |
Conread position: | 186-524 |
Cow position: | chr4:20604141-20604472 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 232 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 163, 58 |
Conread position: | 186-525 |
Cow position: | chr4:60263751-60263417 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 161 |
Conread position: | 186-529 |
Cow position: | chr4:47254515-47254179 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 134 |
Conread position: | 186-530 |
Cow position: | chr4:6206008-6206348 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 75 |
Conread position: | 186-532 |
Cow position: | chr4:356321-356665 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 66 |
Conread position: | 186-533 |
Cow position: | chr4:159569-159915 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 308 |
Conread position: | 186-533 |
Cow position: | chr4:5880577-5880910 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 245 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 209, 102 |
Conread position: | 186-533 |
Cow position: | chr4:6489951-6489606 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 61 |
Conread position: | 186-533 |
Cow position: | chr4:17925547-17925207 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 65 |
Conread position: | 186-533 |
Cow position: | chr4:25599084-25598742 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 299 |
Conread position: | 186-533 |
Cow position: | chr4:27334123-27334470 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 309 |
Conread position: | 186-533 |
Cow position: | chr4:31564892-31564552 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 118 |
Conread position: | 186-533 |
Cow position: | chr4:36896784-36897130 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 309 |
Conread position: | 186-533 |
Cow position: | chr4:39270975-39270645 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 237 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 163, 74 |
Conread position: | 186-533 |
Cow position: | chr4:43319232-43318885 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 310 |
Conread position: | 186-534 |
Cow position: | chr4:18190806-18191153 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 308 |
Conread position: | 186-535 |
Cow position: | chr4:43881517-43881865 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 308 |
Conread position: | 186-538 |
Cow position: | chr4:12240797-12240461 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 24 |
Conread position: | 186-538 |
Cow position: | chr4:32212579-32212932 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 310 |
Conread position: | 186-539 |
Cow position: | chr4:3126203-3126559 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 251 |
Conread position: | 186-539 |
Cow position: | chr4:11110862-11110502 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 318 |
Conread position: | 186-539 |
Cow position: | chr4:28831970-28832321 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 232 |
Conread position: | 186-540 |
Cow position: | chr4:1049849-1049500 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 102 |
Conread position: | 186-540 |
Cow position: | chr4:12587749-12588094 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 50 |
Conread position: | 186-540 |
Cow position: | chr4:13493730-13494083 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 321 |
Conread position: | 186-540 |
Cow position: | chr4:18337274-18337631 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 79 |
Conread position: | 186-540 |
Cow position: | chr4:18424114-18423757 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 271 |
Conread position: | 186-540 |
Cow position: | chr4:48026814-48027164 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 201 |
Conread position: | 186-555 |
Cow position: | chr4:57984399-57984758 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 50 |
Conread position: | 186-571 |
Cow position: | chr4:529811-530195 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 43 |
Conread position: | 186-573 |
Cow position: | chr4:4416486-4416867 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 23 |
Conread position: | 186-574 |
Cow position: | chr4:10881959-10882358 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 97 |
Conread position: | 186-574 |
Cow position: | chr4:27301057-27300673 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 23 |
Conread position: | 186-574 |
Cow position: | chr4:41333124-41333498 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 208, 112 |
Conread position: | 187-574 |
Cow position: | chr4:1930216-1929832 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 278 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 165, 40 |
Conread position: | 191-533 |
Cow position: | chr4:16360328-16360672 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 318 |
Conread position: | 191-533 |
Cow position: | chr4:18517315-18517656 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 304 |
Conread position: | 191-533 |
Cow position: | chr4:33072404-33072063 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 304 |
Conread position: | 191-533 |
Cow position: | chr4:44726013-44726351 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 196 |
Conread position: | 191-540 |
Cow position: | chr4:31669692-31670038 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 173 |
Conread position: | 192-533 |
Cow position: | chr4:67681609-67681949 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 302 |
Conread position: | 192-574 |
Cow position: | chr4:44925105-44924719 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 253 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 169, 339 |
Conread position: | 194-417 |
Cow position: | chr4:17587247-17587034 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 155 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 202, 21 |
Conread position: | 194-575 |
Cow position: | chr4:11837227-11836857 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 249 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 333, 83 |
Conread position: | 201-344 |
Cow position: | chr4:14820941-14820801 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 201-539 |
Cow position: | chr4:34184116-34183777 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 308 |
Conread position: | 203-533 |
Cow position: | chr4:22473781-22474105 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 233 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 5, 49 |
Conread position: | 204-536 |
Cow position: | chr4:44780792-44780465 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 234 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 35, 9 |
Conread position: | 206-360 |
Cow position: | chr4:31626531-31626687 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 146, 0 |
Conread position: | 211-533 |
Cow position: | chr4:16639047-16639368 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 284 |
Conread position: | 222-571 |
Cow position: | chr4:5444389-5444041 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 272 |
Conread position: | 238-534 |
Cow position: | chr4:46573536-46573826 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 205 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 65, 78 |
Conread position: | 252-530 |
Cow position: | chr4:14775919-14776206 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 196 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 94, 253 |
Conread position: | 257-533 |
Cow position: | chr4:16057161-16057434 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 197 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 89, 203 |
Conread position: | 257-540 |
Cow position: | chr4:5926358-5926080 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 193 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 109, 50 |
Conread position: | 259-533 |
Cow position: | chr4:3132115-3131846 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 91, 28 |
Conread position: | 266-540 |
Cow position: | chr4:61713109-61712841 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 197 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 133, 54 |
Conread position: | 269-539 |
Cow position: | chr4:19006062-19005793 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 198 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 82, 237 |
Conread position: | 271-540 |
Cow position: | chr4:10093406-10093669 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 190 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 79, 37 |
Conread position: | 281-533 |
Cow position: | chr4:45298579-45298328 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 187 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 69, 214 |
Conread position: | 309-533 |
Cow position: | chr4:33494125-33494347 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 165 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 43, 74 |
Conread position: | 315-542 |
Cow position: | chr4:49716216-49716432 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 167 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 31, 157 |
Conread position: | 316-531 |
Cow position: | chr4:100263-100049 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 149 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 178 |
Conread position: | 338-533 |
Cow position: | chr4:51042726-51042533 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 59, 156 |
Conread position: | 350-540 |
Cow position: | chr4:14820291-14820110 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 137 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 46, 10 |
Conread position: | 351-571 |
Cow position: | chr4:41958992-41959211 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 45, 141 |
Conread position: | 375-531 |
Cow position: | chr4:54969322-54969472 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 22, 66 |
Show alignments to all cow chromosomes.