Cow genome map
| Conread name: | Ss1.1-risp39_i19.5 |
| Conread position: | 168-324 |
| Cow position: | chr5:18666484-18666638 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 168-368 |
| Cow position: | chr5:4089561-4089758 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-369 |
| Cow position: | chr5:2531745-2531946 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-391 |
| Cow position: | chr5:59144732-59144955 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-507 |
| Cow position: | chr5:59061104-59061444 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 168-527 |
| Cow position: | chr5:46776569-46776916 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 184, 14 |
| Conread position: | 168-540 |
| Cow position: | chr5:23959825-23959453 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-574 |
| Cow position: | chr5:18664282-18664702 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 168-574 |
| Cow position: | chr5:58196516-58196922 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 15 |
| Conread position: | 172-540 |
| Cow position: | chr5:20428552-20428921 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 82, 90 |
| Conread position: | 185-571 |
| Cow position: | chr5:4018695-4018306 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 368 |
| Conread position: | 186-351 |
| Cow position: | chr5:31101118-31100956 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 186-360 |
| Cow position: | chr5:415210-415035 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 163, 91 |
| Conread position: | 186-412 |
| Cow position: | chr5:23687535-23687316 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 209, 65 |
| Conread position: | 186-458 |
| Cow position: | chr5:51335754-51335480 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 157, 265 |
| Conread position: | 186-460 |
| Cow position: | chr5:6588515-6588238 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 166, 53 |
| Conread position: | 186-468 |
| Cow position: | chr5:7274338-7274620 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 201 |
| Conread position: | 186-468 |
| Cow position: | chr5:48467774-48467489 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 186-471 |
| Cow position: | chr5:12643213-12642931 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 11 |
| Conread position: | 186-480 |
| Cow position: | chr5:44784407-44784111 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 275 |
| Conread position: | 186-486 |
| Cow position: | chr5:35526313-35526606 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 67 |
| Conread position: | 186-488 |
| Cow position: | chr5:28950359-28950051 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 186-504 |
| Cow position: | chr5:46645464-46645786 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 186-505 |
| Cow position: | chr5:28012162-28012483 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 186-513 |
| Cow position: | chr5:241708-242032 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 37 |
| Conread position: | 186-524 |
| Cow position: | chr5:27908766-27908427 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 117 |
| Conread position: | 186-529 |
| Cow position: | chr5:49591588-49591251 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 20 |
| Conread position: | 186-530 |
| Cow position: | chr5:41929708-41929382 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 238, 79 |
| Conread position: | 186-531 |
| Cow position: | chr5:2914956-2915297 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 201 |
| Conread position: | 186-531 |
| Cow position: | chr5:3964955-3965301 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 310 |
| Conread position: | 186-532 |
| Cow position: | chr5:10919332-10919676 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 310 |
| Conread position: | 186-533 |
| Cow position: | chr5:6154393-6154048 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 236 |
| Conread position: | 186-533 |
| Cow position: | chr5:14784855-14784519 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 123 |
| Conread position: | 186-533 |
| Cow position: | chr5:18121970-18121630 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 209, 40 |
| Conread position: | 186-533 |
| Cow position: | chr5:34697110-34697456 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 320 |
| Conread position: | 186-533 |
| Cow position: | chr5:37732858-37733196 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 116 |
| Conread position: | 186-533 |
| Cow position: | chr5:46738067-46737723 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 270 |
| Conread position: | 186-533 |
| Cow position: | chr5:49519070-49519413 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 89 |
| Conread position: | 186-533 |
| Cow position: | chr5:55628498-55628844 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-533 |
| Cow position: | chr5:57482032-57481686 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 309 |
| Conread position: | 186-533 |
| Cow position: | chr5:64781508-64781163 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 146 |
| Conread position: | 186-533 |
| Cow position: | chr5:73489051-73488706 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 252 |
| Conread position: | 186-536 |
| Cow position: | chr5:10842872-10842522 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-537 |
| Cow position: | chr5:43003598-43003938 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 186-540 |
| Cow position: | chr5:26078690-26078330 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 65 |
| Conread position: | 186-540 |
| Cow position: | chr5:30579834-30580190 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 310 |
| Conread position: | 186-540 |
| Cow position: | chr5:31707057-31707409 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 308 |
| Conread position: | 186-540 |
| Cow position: | chr5:32363487-32363830 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 83 |
| Conread position: | 186-540 |
| Cow position: | chr5:33187279-33187618 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 209, 28 |
| Conread position: | 186-540 |
| Cow position: | chr5:35300605-35300961 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 221 |
| Conread position: | 186-540 |
| Cow position: | chr5:42505510-42505868 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 310 |
| Conread position: | 186-540 |
| Cow position: | chr5:44459989-44460346 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-561 |
| Cow position: | chr5:41528268-41527892 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 336 |
| Conread position: | 186-567 |
| Cow position: | chr5:53006147-53006520 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 214, 124 |
| Conread position: | 186-570 |
| Cow position: | chr5:45700821-45701203 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 211 |
| Conread position: | 186-571 |
| Cow position: | chr5:10775761-10775380 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 30 |
| Conread position: | 186-571 |
| Cow position: | chr5:29766395-29766785 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 96 |
| Conread position: | 186-571 |
| Cow position: | chr5:54792130-54791744 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 183 |
| Conread position: | 186-573 |
| Cow position: | chr5:32773281-32773671 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 308 |
| Conread position: | 186-574 |
| Cow position: | chr5:4069727-4070115 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 210 |
| Conread position: | 186-574 |
| Cow position: | chr5:4385750-4386150 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 65 |
| Conread position: | 186-574 |
| Cow position: | chr5:4757657-4757258 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 186-574 |
| Cow position: | chr5:38073538-38073938 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-574 |
| Cow position: | chr5:41956849-41956458 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 186-574 |
| Cow position: | chr5:45181638-45181238 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-574 |
| Cow position: | chr5:46807818-46808218 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 309 |
| Conread position: | 186-574 |
| Cow position: | chr5:47830565-47830168 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 176 |
| Conread position: | 186-574 |
| Cow position: | chr5:48808232-48807832 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 356 |
| Conread position: | 186-575 |
| Cow position: | chr5:18401194-18400783 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 135, 202 |
| Conread position: | 186-575 |
| Cow position: | chr5:41961217-41960826 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 200 |
| Conread position: | 186-575 |
| Cow position: | chr5:54861542-54861170 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 54 |
| Conread position: | 187-489 |
| Cow position: | chr5:36444170-36443866 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 155 |
| Conread position: | 187-576 |
| Cow position: | chr5:28241562-28241959 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 19 |
| Conread position: | 188-574 |
| Cow position: | chr5:46005344-46004949 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 210 |
| Conread position: | 191-540 |
| Cow position: | chr5:3503604-3503261 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 112 |
| Conread position: | 191-540 |
| Cow position: | chr5:3786434-3786779 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 192-533 |
| Cow position: | chr5:1341519-1341180 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 270 |
| Conread position: | 192-533 |
| Cow position: | chr5:24099185-24099519 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 43 |
| Conread position: | 192-538 |
| Cow position: | chr5:49130064-49130409 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 98, 191 |
| Conread position: | 192-540 |
| Cow position: | chr5:32308879-32308533 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 126 |
| Conread position: | 192-540 |
| Cow position: | chr5:59639294-59639635 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 176 |
| Conread position: | 192-573 |
| Cow position: | chr5:47894025-47893640 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 192-575 |
| Cow position: | chr5:34902706-34903099 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 158, 43 |
| Conread position: | 194-539 |
| Cow position: | chr5:58152253-58151918 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 186 |
| Conread position: | 201-533 |
| Cow position: | chr5:46629667-46629328 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 202-575 |
| Cow position: | chr5:39246289-39245905 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 114 |
| Conread position: | 204-455 |
| Cow position: | chr5:28024037-28024289 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 148, 88 |
| Conread position: | 204-530 |
| Cow position: | chr5:47822487-47822165 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 154 |
| Conread position: | 206-488 |
| Cow position: | chr5:75624228-75624500 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 197, 33 |
| Conread position: | 207-499 |
| Cow position: | chr5:26067375-26067074 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 216-571 |
| Cow position: | chr5:51770404-51770060 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 217-574 |
| Cow position: | chr5:32947594-32947966 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 224-576 |
| Cow position: | chr5:27002554-27002911 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 239-345 |
| Cow position: | chr5:51169178-51169284 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 248-575 |
| Cow position: | chr5:41554761-41554428 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 45 |
| Conread position: | 256-533 |
| Cow position: | chr5:27056105-27055827 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 241 |
| Conread position: | 259-533 |
| Cow position: | chr5:1227262-1227528 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 126, 101 |
| Conread position: | 266-486 |
| Cow position: | chr5:53703572-53703352 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 266-575 |
| Cow position: | chr5:14344818-14344523 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 131, 66 |
| Conread position: | 268-539 |
| Cow position: | chr5:18273338-18273597 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 280-533 |
| Cow position: | chr5:59282920-59283169 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 293-532 |
| Cow position: | chr5:46664631-46664869 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 201 |
| Conread position: | 296-575 |
| Cow position: | chr5:46668574-46668854 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 309-575 |
| Cow position: | chr5:48532659-48532930 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 312-574 |
| Cow position: | chr5:13046084-13046357 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 312-575 |
| Cow position: | chr5:40788693-40788973 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 322-537 |
| Cow position: | chr5:307685-307470 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 172 |
| Conread position: | 338-540 |
| Cow position: | chr5:9419410-9419207 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 53, 158 |
| Conread position: | 342-567 |
| Cow position: | chr5:41465738-41465972 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 169 |
| Conread position: | 363-574 |
| Cow position: | chr5:31100738-31100516 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 373-533 |
| Cow position: | chr5:10856120-10855963 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 133 |
Show alignments to all cow chromosomes.