Cow genome map

Conread name: Ss1.1-risp39_i19.5

Conread position: 161-533
Cow position:
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 7

Conread position: 168-417
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 184, 17

Conread position: 168-456
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 173, 17

Conread position: 168-540
Cow position:
Alignm length: 378
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 227, 17

Conread position: 168-574
Cow position:
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 17

Conread position: 168-574
Cow position:
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 17

Conread position: 185-533
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 72

Conread position: 185-540
Cow position:
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 310

Conread position: 186-327
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 186-342
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 186-344
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 186-351
Cow position:
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 186-359
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 164, 59

Conread position: 186-418
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 186-420
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 149, 201

Conread position: 186-425
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 153, 28

Conread position: 186-460
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 211, 65

Conread position: 186-468
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 133, 142

Conread position: 186-485
Cow position:
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 53

Conread position: 186-486
Cow position:
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 178

Conread position: 186-493
Cow position:
Alignm length: 311
Alignm identity: 218
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 164, 102

Conread position: 186-505
Cow position:
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 118

Conread position: 186-527
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 135

Conread position: 186-532
Cow position:
Alignm length: 357
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 195, 137

Conread position: 186-532
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 23

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 242

Conread position: 186-533
Cow position:
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 154

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 65

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 308

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 308

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 121

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 309

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 71

Conread position: 186-533
Cow position:
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 110

Conread position: 186-533
Cow position:
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 320

Conread position: 186-533
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 99, 244

Conread position: 186-539
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 308

Conread position: 186-540
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 178

Conread position: 186-540
Cow position:
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 160

Conread position: 186-540
Cow position:
Alignm length: 358
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 102

Conread position: 186-540
Cow position:
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 29

Conread position: 186-540
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 42

Conread position: 186-540
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 141

Conread position: 186-540
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 40

Conread position: 186-541
Cow position:
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 184

Conread position: 186-541
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 106

Conread position: 186-541
Cow position:
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 34

Conread position: 186-555
Cow position:
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 310

Conread position: 186-570
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 166, 99

Conread position: 186-571
Cow position:
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 49

Conread position: 186-574
Cow position:
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 358

Conread position: 186-574
Cow position:
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 65

Conread position: 186-574
Cow position:
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 186-575
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 358

Conread position: 186-575
Cow position:
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 40

Conread position: 186-575
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 199

Conread position: 186-575
Cow position:
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 177

Conread position: 186-575
Cow position:
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 24

Conread position: 186-576
Cow position:
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 74

Conread position: 186-576
Cow position:
Alignm length: 401
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 44

Conread position: 187-533
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 64

Conread position: 188-541
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 168

Conread position: 188-574
Cow position:
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 307

Conread position: 191-533
Cow position:
Alignm length: 346
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 11

Conread position: 191-533
Cow position:
Alignm length: 344
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 25

Conread position: 191-540
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 56

Conread position: 191-540
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 135

Conread position: 192-533
Cow position:
Alignm length: 343
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 157

Conread position: 192-533
Cow position:
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 313

Conread position: 192-533
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 49

Conread position: 192-533
Cow position:
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 172

Conread position: 192-557
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 36

Conread position: 192-574
Cow position:
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 75

Conread position: 194-540
Cow position:
Alignm length: 348
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 199, 119

Conread position: 201-384
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 148, 102

Conread position: 201-533
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 201-541
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 141, 76

Conread position: 201-573
Cow position:
Alignm length: 381
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 202-533
Cow position:
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 267

Conread position: 202-574
Cow position:
Alignm length: 383
Alignm identity: 258
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 150, 49

Conread position: 203-533
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 289

Conread position: 203-540
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 178, 23

Conread position: 203-542
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 147, 54

Conread position: 205-533
Cow position:
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 118

Conread position: 207-539
Cow position:
Alignm length: 338
Alignm identity: 214
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 114

Conread position: 215-575
Cow position:
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 216-532
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 179, 20

Conread position: 216-533
Cow position:
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 235

Conread position: 217-533
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 84, 98

Conread position: 218-540
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 290

Conread position: 219-533
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 149

Conread position: 223-540
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 239

Conread position: 225-523
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 62, 11

Conread position: 226-533
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 10

Conread position: 244-555
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 14

Conread position: 247-490
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 11, 131

Conread position: 251-575
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 136

Conread position: 256-540
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 191

Conread position: 259-533
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 87, 134

Conread position: 282-540
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 70, 174

Conread position: 285-574
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 293-533
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 129

Conread position: 297-540
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 17

Conread position: 347-485
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 351-533
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 142

Conread position: 351-540
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 142

Conread position: 351-573
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 45, 162

Conread position: 368-574
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 19

Conread position: 370-500
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.