Cow genome map
| Conread name: | Ss1.1-rjca03c_l18.5.5 |
| Conread position: | 2-181 |
| Cow position: | chr17:42793186-42793005 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 258-589 |
| Cow position: | chr17:42792952-42792620 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 87 |
| Conread position: | 566-685 |
| Cow position: | chr17:42790508-42790389 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 682-857 |
| Cow position: | chr17:42788137-42787962 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 856-1045 |
| Cow position: | chr17:42786554-42786365 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1043-1221 |
| Cow position: | chr17:42786244-42786066 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1231-1369 |
| Cow position: | chr17:42784910-42784772 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1368-1545 |
| Cow position: | chr17:42782123-42781947 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 1536-1737 |
| Cow position: | chr17:42781229-42781028 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1732-1937 |
| Cow position: | chr17:42777741-42777532 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 150 |
| Conread position: | 1949-2146 |
| Cow position: | chr17:42777279-42777083 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 5, 92 |
Show alignments to all cow chromosomes.