Cow genome map
| Conread name: | Ss1.1-rjca18c_o23.5 |
| Conread position: | 1-136 |
| Cow position: | chr3:4751379-4751514 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 130 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-243 |
| Cow position: | chr3:4751627-4751743 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 109, 97 |
| Conread position: | 224-312 |
| Cow position: | chr3:4752876-4752964 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 313-437 |
| Cow position: | chr3:4753354-4753478 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 116 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-526 |
| Cow position: | chr3:4754346-4754451 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-637 |
| Cow position: | chr3:4754616-4754728 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 636-714 |
| Cow position: | chr3:4755536-4755614 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 74 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 713-782 |
| Cow position: | chr3:4755779-4755848 (view UCSC Genome Browser custom track) |
| Alignm length: | 70 |
| Alignm identity: | 68 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 783-925 |
| Cow position: | chr3:4756365-4756508 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 920-1108 |
| Cow position: | chr3:4756733-4756921 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1106-1218 |
| Cow position: | chr3:4757008-4757120 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1217-1380 |
| Cow position: | chr3:4757656-4757819 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1379-1577 |
| Cow position: | chr3:4758718-4758916 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1571-1833 |
| Cow position: | chr3:4759165-4759408 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 65 |
| Conread position: | 1846-2049 |
| Cow position: | chr3:4759397-4759607 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 163 |
Show alignments to all cow chromosomes.