Cow genome map


           Conread name:
           Ss1.1-rjca32c_n6.5
        

               Conread position:
               2-267
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               156, 38
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               3-318
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               4-186
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               4-223
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               100, 201
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               184, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               223, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 46
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               177, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               226, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               180, 18
               

               Conread position:
               4-328
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               104, 13
               

               Conread position:
               4-343
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               116, 36
               

               Conread position:
               5-126
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               5-126
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               5-229
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               118, 43
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 43
               

               Conread position:
               5-281
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               153, 43
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 43
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               182, 31
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               98, 45
               

               Conread position:
               5-311
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               178, 57
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               303, 42
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               35, 297
               

               Conread position:
               5-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 43
               

               Conread position:
               5-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               183, 43
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 95
               

               Conread position:
               5-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 23
               

               Conread position:
               6-278
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               117, 42
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               6-335
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               160, 42
               

               Conread position:
               7-254
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               7-305
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               97, 41
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               114, 41
               

               Conread position:
               7-322
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               301, 41
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               236, 41
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               181, 38
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               13-326
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               230, 27
               

               Conread position:
               17-332
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               163, 33
               

               Conread position:
               25-326
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 23
               

               Conread position:
               27-326
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               161, 21
               

               Conread position:
               28-308
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               85, 14
               

               Conread position:
               28-326
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               173, 20
               

               Conread position:
               32-300
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 89
               

               Conread position:
               40-326
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               42-326
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               165, 56
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               138, 250
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               58, 63
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               57, 199
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               58, 247
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 58
               

               Conread position:
               45-328
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               45-328
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               56-308
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               67-322
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               116, 230
               

               Conread position:
               79-322
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               166, 43
               

               Conread position:
               80-308
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               80-323
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               23, 184
               

               Conread position:
               87-326
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 208
               

               Conread position:
               109-326
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               73, 185
               

               Conread position:
               110-326
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               13, 183
               

               Conread position:
               116-326
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 132
               

               Conread position:
               139-326
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 109
               
Show alignments to all cow chromosomes.