Cow genome map


           Conread name:
           Ss1.1-rjca32c_n6.5
        

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               4-228
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               4-236
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               4-272
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               184, 12
               

               Conread position:
               4-286
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               4-304
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               241, 44
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               99, 34
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               109, 46
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               5-213
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               178, 19
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 43
               

               Conread position:
               6-305
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               177, 42
               

               Conread position:
               6-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 7
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               10-310
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               113, 38
               

               Conread position:
               11-271
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               175, 37
               

               Conread position:
               24-157
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               31-236
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               34-327
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               85, 8
               

               Conread position:
               45-197
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               45-225
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               142, 251
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 189
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 258
               

               Conread position:
               80-305
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               81-319
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               91-326
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               93, 13
               
Show alignments to all cow chromosomes.