Cow genome map


           Conread name:
           Ss1.1-rjca32c_n6.5
        

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 45
               

               Conread position:
               4-228
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               89, 35
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               111, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               180, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 27
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               5-177
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               5-240
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               183, 43
               

               Conread position:
               5-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 43
               

               Conread position:
               5-278
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               166, 43
               

               Conread position:
               5-323
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 23
               

               Conread position:
               5-324
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               174, 29
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               151, 41
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 41
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               178, 41
               

               Conread position:
               7-328
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               176, 41
               

               Conread position:
               8-228
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               95, 32
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               10-272
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               225, 34
               

               Conread position:
               10-272
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               81, 38
               

               Conread position:
               10-305
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               142, 31
               

               Conread position:
               10-308
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 38
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 38
               

               Conread position:
               21-326
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               23-323
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               152, 25
               

               Conread position:
               23-330
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 25
               

               Conread position:
               24-324
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               27-308
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               28-326
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               45-324
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 256
               

               Conread position:
               45-324
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 200
               

               Conread position:
               45-325
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               137, 202
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               46-342
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 178
               

               Conread position:
               50-342
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               134, 87
               

               Conread position:
               55-326
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 244
               

               Conread position:
               57-323
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               129, 240
               

               Conread position:
               60-326
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               77-249
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               94-326
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 203
               
Show alignments to all cow chromosomes.