Cow genome map


           Conread name:
           Ss1.1-rjca32c_n6.5
        

               Conread position:
               3-185
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               184, 22
               

               Conread position:
               3-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               109, 36
               

               Conread position:
               4-265
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               76, 44
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               183, 18
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 36
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               90, 44
               

               Conread position:
               4-310
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               4-310
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               178, 44
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               132, 44
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 44
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               195, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               64, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               302, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               185, 44
               

               Conread position:
               4-327
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               4-327
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               4-328
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               179, 44
               

               Conread position:
               4-342
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               88, 44
               

               Conread position:
               5-159
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               5-162
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               5-279
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               177, 42
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               178, 17
               

               Conread position:
               5-326
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               5-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               166, 20
               

               Conread position:
               5-327
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 43
               

               Conread position:
               5-335
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               6-338
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               161, 42
               

               Conread position:
               7-165
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 41
               

               Conread position:
               7-197
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               7-216
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               7-217
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               7-228
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 155
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               176, 33
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               106, 297
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               79, 98
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               184, 32
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               176, 33
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               176, 43
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               97, 24
               

               Conread position:
               8-279
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               115, 34
               

               Conread position:
               8-305
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               9-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 39
               

               Conread position:
               9-326
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               178, 39
               

               Conread position:
               10-234
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               173, 38
               

               Conread position:
               10-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               163, 24
               

               Conread position:
               10-322
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               176, 40
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 38
               

               Conread position:
               11-156
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               11-327
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               176, 37
               

               Conread position:
               12-304
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               18-269
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               203, 19
               

               Conread position:
               22-326
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               162, 26
               

               Conread position:
               23-154
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               23-322
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 25
               

               Conread position:
               25-325
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               27-322
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               27-333
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               28-278
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               28-328
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 272
               

               Conread position:
               28-333
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 20
               

               Conread position:
               32-326
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               42-307
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               145, 65
               

               Conread position:
               44-295
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               44-328
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 170
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               142, 203
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               182, 58
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               137, 58
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 255
               

               Conread position:
               45-331
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               59, 211
               

               Conread position:
               47-326
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               50-326
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               144, 53
               

               Conread position:
               60-326
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               72-326
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               74-322
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               109, 81
               

               Conread position:
               80-263
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               92-304
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               98-330
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               103-339
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               107-308
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               116-326
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 175
               

               Conread position:
               122-324
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               157-324
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 141
               
Show alignments to all cow chromosomes.