Cow genome map


           Conread name:
           Ss1.1-rjca32c_n6.5
        

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               99, 45
               

               Conread position:
               4-182
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-196
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               216, 17
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               4-305
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               111, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               119, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               99, 242
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               4-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               4-319
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               99, 35
               

               Conread position:
               4-319
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 44
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 182
               

               Conread position:
               4-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               106, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               5-185
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               97, 43
               

               Conread position:
               5-272
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               182, 88
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               178, 43
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               118, 43
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               5-329
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               150, 43
               

               Conread position:
               6-260
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               237, 42
               

               Conread position:
               6-327
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               223, 44
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               7-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               7-318
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               151, 41
               

               Conread position:
               7-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               8-308
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               178, 31
               

               Conread position:
               10-315
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 38
               

               Conread position:
               14-289
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               23-308
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               28-308
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               159, 20
               

               Conread position:
               28-308
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               28-323
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               164, 20
               

               Conread position:
               42-304
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               45-222
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               45-308
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               67, 139
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 112
               

               Conread position:
               45-326
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               142, 101
               

               Conread position:
               45-354
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               46-308
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               55-270
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 175
               

               Conread position:
               55-286
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               154, 127
               

               Conread position:
               69-281
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               74-325
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               109, 67
               

               Conread position:
               85-312
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               85-326
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               160, 44
               
Show alignments to all cow chromosomes.