Cow genome map

Conread name: Ss1.1-rjca32c_n6.5

Conread position: 3-272
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 172, 45

Conread position: 4-272
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 179, 46

Conread position: 4-300
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 44

Conread position: 4-308
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 36

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 119, 44

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 44

Conread position: 4-308
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 100, 44

Conread position: 4-308
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 46

Conread position: 4-326
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 100, 38

Conread position: 4-326
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 21

Conread position: 5-308
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 154, 41

Conread position: 5-322
Cow position:
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 7-281
Cow position:
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 43

Conread position: 7-308
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 41

Conread position: 7-308
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 180, 41

Conread position: 7-326
Cow position:
Alignm length: 326
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 116, 41

Conread position: 7-333
Cow position:
Alignm length: 330
Alignm identity: 222
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 168, 41

Conread position: 10-292
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 38

Conread position: 10-322
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 38

Conread position: 13-322
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 162, 35

Conread position: 20-317
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 28

Conread position: 21-326
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 23-281
Cow position:
Alignm length: 262
Alignm identity: 168
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 25

Conread position: 27-221
Cow position:
Alignm length: 198
Alignm identity: 159
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 156, 15

Conread position: 28-228
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 155, 20

Conread position: 30-269
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 35-323
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 126, 6

Conread position: 44-308
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 156, 60

Conread position: 45-308
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 149, 59

Conread position: 45-326
Cow position:
Alignm length: 293
Alignm identity: 196
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 103, 59

Conread position: 59-308
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 44

Conread position: 80-326
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 216

Conread position: 88-239
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 15

Conread position: 89-308
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 206

Conread position: 97-326
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 150

Conread position: 107-308
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 190

Conread position: 123-329
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 101

Show alignments to all cow chromosomes.