Cow genome map
| Conread name: | Ss1.1-rjca32c_n6.5 |
| Conread position: | 3-319 |
| Cow position: | chr26:1626962-1627291 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 4-275 |
| Cow position: | chr26:9561796-9561535 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 98, 44 |
| Conread position: | 4-301 |
| Cow position: | chr26:32051915-32052210 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 4-308 |
| Cow position: | chr26:6848459-6848155 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 4-308 |
| Cow position: | chr26:14894926-14895230 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 124, 44 |
| Conread position: | 4-308 |
| Cow position: | chr26:17395928-17395623 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 4-308 |
| Cow position: | chr26:30588386-30588079 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 5-185 |
| Cow position: | chr26:3864575-3864394 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 75 |
| Conread position: | 7-326 |
| Cow position: | chr26:12587579-12587253 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 10-216 |
| Cow position: | chr26:6806096-6805893 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 11-284 |
| Cow position: | chr26:8863283-8863019 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 178, 23 |
| Conread position: | 11-312 |
| Cow position: | chr26:11031155-11031439 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 21-305 |
| Cow position: | chr26:17325071-17325354 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 27 |
| Conread position: | 23-281 |
| Cow position: | chr26:12558600-12558341 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 117, 25 |
| Conread position: | 25-228 |
| Cow position: | chr26:16162209-16162004 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 133, 23 |
| Conread position: | 42-326 |
| Cow position: | chr26:19350499-19350212 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 61 |
| Conread position: | 44-309 |
| Cow position: | chr26:9843885-9843613 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 251 |
| Conread position: | 45-228 |
| Cow position: | chr26:15143737-15143552 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 45-308 |
| Cow position: | chr26:5676131-5676395 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 58 |
| Conread position: | 45-308 |
| Cow position: | chr26:18853244-18853509 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chr26:1087420-1087134 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chr26:2199650-2199941 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 252 |
| Conread position: | 45-326 |
| Cow position: | chr26:3029823-3029538 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-328 |
| Cow position: | chr26:21825667-21825377 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 188 |
| Conread position: | 56-278 |
| Cow position: | chr26:35399090-35398880 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 187, 13 |
| Conread position: | 69-279 |
| Cow position: | chr26:8086213-8086429 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.