Cow genome map
| Conread name: | Ss1.1-rjca32c_n6.5 |
| Conread position: | 4-185 |
| Cow position: | chr27:29854270-29854452 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 44 |
| Conread position: | 4-236 |
| Cow position: | chr27:15036670-15036437 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 4-267 |
| Cow position: | chr27:26325994-26326259 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 4-292 |
| Cow position: | chr27:27414799-27415089 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 4-308 |
| Cow position: | chr27:3234620-3234310 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 4-308 |
| Cow position: | chr27:13898242-13898547 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 4-308 |
| Cow position: | chr27:14459531-14459221 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 4-308 |
| Cow position: | chr27:15636426-15636121 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 47 |
| Conread position: | 4-308 |
| Cow position: | chr27:27663919-27664225 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 5-182 |
| Cow position: | chr27:27507070-27507251 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 96, 43 |
| Conread position: | 5-236 |
| Cow position: | chr27:6010262-6010488 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 7-245 |
| Cow position: | chr27:30273280-30273040 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 7-270 |
| Cow position: | chr27:11095728-11095993 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 7-308 |
| Cow position: | chr27:9330656-9330957 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 7-308 |
| Cow position: | chr27:9992276-9991974 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 41 |
| Conread position: | 7-326 |
| Cow position: | chr27:1677647-1677338 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 180, 41 |
| Conread position: | 8-308 |
| Cow position: | chr27:1210280-1210578 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 10-308 |
| Cow position: | chr27:25057843-25058140 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 28-327 |
| Cow position: | chr27:8568157-8568454 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 158, 20 |
| Conread position: | 32-298 |
| Cow position: | chr27:21286944-21286677 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 16 |
| Conread position: | 49-286 |
| Cow position: | chr27:11486278-11486515 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 186 |
| Conread position: | 50-322 |
| Cow position: | chr27:2377487-2377752 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 137, 48 |
| Conread position: | 80-308 |
| Cow position: | chr27:25803687-25803467 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 137-322 |
| Cow position: | chr27:15275011-15274823 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 156 |
| Conread position: | 154-326 |
| Cow position: | chr27:25332017-25331846 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 79 |
Show alignments to all cow chromosomes.