Cow genome map

Conread name: Ss1.1-rjca32c_n6.5

Conread position: 2-304
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 102, 46

Conread position: 3-185
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 45

Conread position: 3-328
Cow position:
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 46

Conread position: 4-228
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 97, 44

Conread position: 4-259
Cow position:
Alignm length: 259
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 44

Conread position: 4-276
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 119, 44

Conread position: 4-286
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 97, 39

Conread position: 4-292
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 44

Conread position: 4-292
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 99, 44

Conread position: 4-304
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 44

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 44

Conread position: 4-308
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 184, 44

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 109, 44

Conread position: 4-308
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 44

Conread position: 4-308
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 183, 44

Conread position: 4-308
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 98, 44

Conread position: 4-308
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 44

Conread position: 4-308
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 44

Conread position: 4-308
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 44

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 44

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 44

Conread position: 4-308
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 50

Conread position: 4-308
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 44

Conread position: 4-308
Cow position:
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 197

Conread position: 4-322
Cow position:
Alignm length: 331
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 47

Conread position: 4-325
Cow position:
Alignm length: 326
Alignm identity: 218
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 44

Conread position: 4-350
Cow position:
Alignm length: 351
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 44

Conread position: 5-272
Cow position:
Alignm length: 271
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 114, 32

Conread position: 5-290
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 43

Conread position: 5-308
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 191, 19

Conread position: 7-225
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 180, 41

Conread position: 7-289
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 41

Conread position: 7-326
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 106, 41

Conread position: 7-326
Cow position:
Alignm length: 323
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 236, 33

Conread position: 7-326
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 43

Conread position: 7-331
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 176, 41

Conread position: 8-305
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 40

Conread position: 8-308
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 179, 40

Conread position: 8-308
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 23

Conread position: 8-318
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 235, 43

Conread position: 9-278
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 226, 39

Conread position: 9-308
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 114, 39

Conread position: 10-276
Cow position:
Alignm length: 270
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 172, 38

Conread position: 10-289
Cow position:
Alignm length: 285
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 38

Conread position: 10-326
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 172, 38

Conread position: 11-238
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 40

Conread position: 17-323
Cow position:
Alignm length: 319
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 31

Conread position: 19-276
Cow position:
Alignm length: 259
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 106

Conread position: 23-308
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 25

Conread position: 24-233
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 24

Conread position: 28-308
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 85, 20

Conread position: 33-161
Cow position:
Alignm length: 129
Alignm identity: 112
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 45-276
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 184, 59

Conread position: 45-305
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 184, 122

Conread position: 45-308
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 59

Conread position: 45-308
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 59, 253

Conread position: 45-326
Cow position:
Alignm length: 288
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 59

Conread position: 45-326
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 124

Conread position: 50-241
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 137, 64

Conread position: 54-223
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 54-326
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 248

Conread position: 81-327
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 22

Conread position: 88-308
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 16

Conread position: 92-308
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 96, 11

Conread position: 134-319
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 34

Conread position: 158-308
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 92

Show alignments to all cow chromosomes.