Cow genome map
| Conread name: | Ss1.1-rjca32c_n6.5 |
| Conread position: | 1-327 |
| Cow position: | chrX:13182394-13182078 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 38 |
| Conread position: | 3-222 |
| Cow position: | chrX:18767897-18768114 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 181, 45 |
| Conread position: | 3-270 |
| Cow position: | chrX:1391665-1391933 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 184, 38 |
| Conread position: | 3-325 |
| Cow position: | chrX:12315032-12314703 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 45 |
| Conread position: | 4-180 |
| Cow position: | chrX:505606-505430 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 4-225 |
| Cow position: | chrX:25612783-25612996 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-225 |
| Cow position: | chrX:27006216-27006440 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 4-286 |
| Cow position: | chrX:17613300-17613016 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 134, 18 |
| Conread position: | 4-291 |
| Cow position: | chrX:2481905-2481618 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 182, 46 |
| Conread position: | 4-292 |
| Cow position: | chrX:24195672-24195397 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 229, 44 |
| Conread position: | 4-305 |
| Cow position: | chrX:12669024-12668724 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 4-305 |
| Cow position: | chrX:30057777-30058077 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 130, 33 |
| Conread position: | 4-307 |
| Cow position: | chrX:22488870-22489172 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:321190-321495 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:971500-971809 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:1547698-1548008 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:5296824-5296515 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:13412407-13412104 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 185, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:15126511-15126197 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:18952956-18952651 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 183, 36 |
| Conread position: | 4-308 |
| Cow position: | chrX:21830253-21830559 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:23040398-23040094 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:23277751-23278053 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:23455292-23454988 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:26757890-26757585 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 183, 47 |
| Conread position: | 4-308 |
| Cow position: | chrX:27593265-27592957 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:27987102-27986793 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 246 |
| Conread position: | 4-308 |
| Cow position: | chrX:28650829-28650524 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:29096920-29097225 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 183, 44 |
| Conread position: | 4-308 |
| Cow position: | chrX:30231372-30231068 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 183, 36 |
| Conread position: | 4-308 |
| Cow position: | chrX:38148315-38148625 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 44 |
| Conread position: | 4-319 |
| Cow position: | chrX:27315999-27316318 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 4-323 |
| Cow position: | chrX:29793309-29792985 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 4-325 |
| Cow position: | chrX:29885711-29886036 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 4-326 |
| Cow position: | chrX:18553154-18553478 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 94, 44 |
| Conread position: | 4-326 |
| Cow position: | chrX:29286154-29286483 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 4-329 |
| Cow position: | chrX:28626910-28626582 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 5-255 |
| Cow position: | chrX:34345959-34346201 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 238, 12 |
| Conread position: | 5-272 |
| Cow position: | chrX:21269335-21269061 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 5-305 |
| Cow position: | chrX:4752890-4752600 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 43 |
| Conread position: | 5-318 |
| Cow position: | chrX:41102740-41102425 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 43 |
| Conread position: | 5-323 |
| Cow position: | chrX:24134526-24134213 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 43 |
| Conread position: | 5-324 |
| Cow position: | chrX:2011971-2011656 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 43 |
| Conread position: | 5-325 |
| Cow position: | chrX:10416732-10416404 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 43 |
| Conread position: | 5-325 |
| Cow position: | chrX:29778783-29778464 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 43 |
| Conread position: | 5-326 |
| Cow position: | chrX:13416708-13416383 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 43 |
| Conread position: | 5-326 |
| Cow position: | chrX:26426840-26426533 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 32 |
| Conread position: | 5-327 |
| Cow position: | chrX:30366056-30365733 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 178, 43 |
| Conread position: | 5-342 |
| Cow position: | chrX:24476471-24476117 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 5-343 |
| Cow position: | chrX:6282033-6281688 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 7-221 |
| Cow position: | chrX:31494146-31494363 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 98 |
| Conread position: | 7-270 |
| Cow position: | chrX:28554338-28554603 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 176, 41 |
| Conread position: | 7-308 |
| Cow position: | chrX:2102913-2103214 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 180, 33 |
| Conread position: | 7-308 |
| Cow position: | chrX:9093286-9093603 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 7-308 |
| Cow position: | chrX:9126087-9126390 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 106, 97 |
| Conread position: | 7-308 |
| Cow position: | chrX:16700030-16700348 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 7-308 |
| Cow position: | chrX:23389789-23389489 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 7-318 |
| Cow position: | chrX:34219038-34219352 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 7-323 |
| Cow position: | chrX:13053734-13054071 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 94, 304 |
| Conread position: | 7-323 |
| Cow position: | chrX:44388497-44388808 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 152, 33 |
| Conread position: | 7-326 |
| Cow position: | chrX:979323-979645 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 7-326 |
| Cow position: | chrX:5335758-5335436 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 41 |
| Conread position: | 7-326 |
| Cow position: | chrX:8588892-8589211 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 176, 32 |
| Conread position: | 7-326 |
| Cow position: | chrX:13397491-13397170 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 7-326 |
| Cow position: | chrX:15590708-15591036 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 7-326 |
| Cow position: | chrX:16276374-16276697 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 181, 43 |
| Conread position: | 7-326 |
| Cow position: | chrX:23132702-23133017 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 7-326 |
| Cow position: | chrX:30202004-30201682 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 7-326 |
| Cow position: | chrX:32066437-32066118 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 175, 41 |
| Conread position: | 7-326 |
| Cow position: | chrX:35530590-35530902 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 116, 161 |
| Conread position: | 7-327 |
| Cow position: | chrX:15487022-15486720 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 233, 33 |
| Conread position: | 7-328 |
| Cow position: | chrX:7031188-7031512 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 7-331 |
| Cow position: | chrX:6872345-6872016 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 8-308 |
| Cow position: | chrX:21580194-21580495 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 40 |
| Conread position: | 8-321 |
| Cow position: | chrX:41850470-41850156 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 175, 43 |
| Conread position: | 9-308 |
| Cow position: | chrX:26528705-26529004 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 10-225 |
| Cow position: | chrX:4797055-4797271 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 10-269 |
| Cow position: | chrX:23020060-23020315 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 177, 38 |
| Conread position: | 10-281 |
| Cow position: | chrX:23385784-23385512 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 200 |
| Conread position: | 10-323 |
| Cow position: | chrX:9009066-9009385 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 10-346 |
| Cow position: | chrX:41888247-41887933 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 178, 7 |
| Conread position: | 11-233 |
| Cow position: | chrX:47397220-47397000 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 14-308 |
| Cow position: | chrX:23213613-23213335 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 23-216 |
| Cow position: | chrX:16780047-16780235 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 23-308 |
| Cow position: | chrX:31199297-31199592 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 23-317 |
| Cow position: | chrX:8574734-8574452 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 133, 25 |
| Conread position: | 25-233 |
| Cow position: | chrX:6641583-6641374 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 156, 15 |
| Conread position: | 26-281 |
| Cow position: | chrX:21971565-21971822 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 22 |
| Conread position: | 27-266 |
| Cow position: | chrX:16015690-16015432 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 28-322 |
| Cow position: | chrX:4411404-4411691 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 159, 20 |
| Conread position: | 28-322 |
| Cow position: | chrX:17667034-17666739 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 28-326 |
| Cow position: | chrX:7482381-7482681 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 28-326 |
| Cow position: | chrX:14460272-14460573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 28-326 |
| Cow position: | chrX:29935344-29935646 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 28-326 |
| Cow position: | chrX:37812911-37813201 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 28-326 |
| Cow position: | chrX:37849748-37850038 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 29-322 |
| Cow position: | chrX:20798071-20798365 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 19 |
| Conread position: | 29-326 |
| Cow position: | chrX:11148586-11148287 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 153, 75 |
| Conread position: | 44-265 |
| Cow position: | chrX:45377342-45377113 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 45-260 |
| Cow position: | chrX:2604812-2605038 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 210 |
| Conread position: | 45-268 |
| Cow position: | chrX:31186457-31186226 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 45-305 |
| Cow position: | chrX:5283004-5282754 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-305 |
| Cow position: | chrX:39563171-39562907 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 109 |
| Conread position: | 45-308 |
| Cow position: | chrX:2562094-2561830 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 45-308 |
| Cow position: | chrX:5394245-5393976 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 66, 206 |
| Conread position: | 45-308 |
| Cow position: | chrX:10745387-10745123 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-308 |
| Cow position: | chrX:14784699-14784437 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 45-308 |
| Cow position: | chrX:15623733-15623471 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 45-308 |
| Cow position: | chrX:16811678-16811416 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 63 |
| Conread position: | 45-308 |
| Cow position: | chrX:27425561-27425296 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-308 |
| Cow position: | chrX:29172998-29172733 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 137, 246 |
| Conread position: | 45-322 |
| Cow position: | chrX:35940485-35940217 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 142, 175 |
| Conread position: | 45-326 |
| Cow position: | chrX:674440-674153 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 131 |
| Conread position: | 45-326 |
| Cow position: | chrX:3084361-3084090 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chrX:3375141-3374859 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 138, 62 |
| Conread position: | 45-326 |
| Cow position: | chrX:5322961-5322678 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 45-326 |
| Cow position: | chrX:5864159-5864443 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chrX:7752666-7752949 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 45-326 |
| Cow position: | chrX:11422635-11422920 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chrX:12287639-12287354 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 149, 137 |
| Conread position: | 45-326 |
| Cow position: | chrX:12354006-12354284 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 156, 34 |
| Conread position: | 45-326 |
| Cow position: | chrX:12702939-12702654 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chrX:13075932-13075647 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 68, 59 |
| Conread position: | 45-326 |
| Cow position: | chrX:16362359-16362074 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 74, 242 |
| Conread position: | 45-326 |
| Cow position: | chrX:17477660-17477375 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 45-326 |
| Cow position: | chrX:22618533-22618260 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 45-326 |
| Cow position: | chrX:28585744-28586029 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 45-326 |
| Cow position: | chrX:30011763-30012048 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 45-326 |
| Cow position: | chrX:30138817-30138528 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 213 |
| Conread position: | 45-330 |
| Cow position: | chrX:8962811-8962521 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 249 |
| Conread position: | 45-331 |
| Cow position: | chrX:18659023-18658740 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 138, 27 |
| Conread position: | 46-308 |
| Cow position: | chrX:14595612-14595874 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 129 |
| Conread position: | 55-308 |
| Cow position: | chrX:30183162-30182910 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 132, 174 |
| Conread position: | 58-319 |
| Cow position: | chrX:36136784-36136516 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 196 |
| Conread position: | 63-326 |
| Cow position: | chrX:10385088-10385349 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 170, 121 |
| Conread position: | 72-323 |
| Cow position: | chrX:28868447-28868199 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 112, 38 |
| Conread position: | 73-326 |
| Cow position: | chrX:8610912-8610652 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 177 |
| Conread position: | 78-330 |
| Cow position: | chrX:6249680-6249426 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 214 |
| Conread position: | 85-343 |
| Cow position: | chrX:18535255-18535519 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 38, 212 |
| Conread position: | 100-324 |
| Cow position: | chrX:19875333-19875563 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 101-326 |
| Cow position: | chrX:17052364-17052592 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 145 |
| Conread position: | 110-321 |
| Cow position: | chrX:30069015-30068802 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 13 |
Show alignments to all cow chromosomes.