Cow genome map

Conread name: Ss1.1-rjej03b_m20.5

Conread position: 1-739
Cow position:
Alignm length: 754
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 121

Conread position: 1-890
Cow position:
Alignm length: 895
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 7

Conread position: 14-851
Cow position:
Alignm length: 845
Alignm identity: 488
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 127, 122

Conread position: 14-854
Cow position:
Alignm length: 857
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 38

Conread position: 14-900
Cow position:
Alignm length: 894
Alignm identity: 520
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 122

Conread position: 16-758
Cow position:
Alignm length: 747
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 205

Conread position: 17-636
Cow position:
Alignm length: 628
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 80

Conread position: 28-758
Cow position:
Alignm length: 736
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 189

Conread position: 28-886
Cow position:
Alignm length: 872
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 129

Conread position: 33-902
Cow position:
Alignm length: 882
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 164

Conread position: 34-902
Cow position:
Alignm length: 873
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 17

Conread position: 36-904
Cow position:
Alignm length: 877
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 160

Conread position: 36-907
Cow position:
Alignm length: 877
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 160

Conread position: 37-866
Cow position:
Alignm length: 839
Alignm identity: 492
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 23

Conread position: 37-904
Cow position:
Alignm length: 875
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 161

Conread position: 37-904
Cow position:
Alignm length: 876
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 161

Conread position: 57-866
Cow position:
Alignm length: 817
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 57-907
Cow position:
Alignm length: 861
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 88

Conread position: 58-726
Cow position:
Alignm length: 674
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 114

Conread position: 61-902
Cow position:
Alignm length: 844
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 50

Conread position: 70-904
Cow position:
Alignm length: 841
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 276

Conread position: 70-904
Cow position:
Alignm length: 840
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 276

Conread position: 79-673
Cow position:
Alignm length: 601
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 184

Conread position: 166-727
Cow position:
Alignm length: 570
Alignm identity: 343
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 23

Conread position: 216-907
Cow position:
Alignm length: 703
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 148

Conread position: 217-757
Cow position:
Alignm length: 546
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 46

Conread position: 223-904
Cow position:
Alignm length: 684
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 382

Conread position: 237-841
Cow position:
Alignm length: 611
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 109

Conread position: 239-719
Cow position:
Alignm length: 485
Alignm identity: 291
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 40

Conread position: 247-904
Cow position:
Alignm length: 666
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 268

Conread position: 301-767
Cow position:
Alignm length: 471
Alignm identity: 289
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 18

Conread position: 301-904
Cow position:
Alignm length: 604
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 302-842
Cow position:
Alignm length: 546
Alignm identity: 333
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 64

Conread position: 334-853
Cow position:
Alignm length: 525
Alignm identity: 317
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 23

Conread position: 376-899
Cow position:
Alignm length: 529
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 69

Conread position: 405-904
Cow position:
Alignm length: 504
Alignm identity: 312
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 53, 41

Conread position: 405-907
Cow position:
Alignm length: 509
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 31

Conread position: 418-904
Cow position:
Alignm length: 490
Alignm identity: 307
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 24, 18

Conread position: 427-894
Cow position:
Alignm length: 471
Alignm identity: 294
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 27, 21

Conread position: 456-768
Cow position:
Alignm length: 315
Alignm identity: 199
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 64

Conread position: 532-902
Cow position:
Alignm length: 371
Alignm identity: 230
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 582-907
Cow position:
Alignm length: 326
Alignm identity: 202
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 582-907
Cow position:
Alignm length: 328
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 176, 197

Show alignments to all cow chromosomes.