Cow genome map
Conread name: | Ss1.1-rjej03b_m20.5 |
Conread position: | 1-431 |
Cow position: | chr17:22473531-22473962 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 184 |
Conread position: | 1-651 |
Cow position: | chr17:22589820-22589173 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 7 |
Conread position: | 1-657 |
Cow position: | chr17:22452268-22451612 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 171 |
Conread position: | 1-672 |
Cow position: | chr17:22552150-22551480 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 7 |
Conread position: | 1-833 |
Cow position: | chr17:22499281-22498459 (view UCSC Genome Browser custom track) |
Alignm length: | 834 |
Alignm identity: | 542 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 6 |
Conread position: | 1-902 |
Cow position: | chr17:22552402-22551502 (view UCSC Genome Browser custom track) |
Alignm length: | 905 |
Alignm identity: | 607 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 14 |
Conread position: | 1-902 |
Cow position: | chr17:22552486-22551586 (view UCSC Genome Browser custom track) |
Alignm length: | 909 |
Alignm identity: | 626 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 7 |
Conread position: | 1-902 |
Cow position: | chr17:22552822-22551922 (view UCSC Genome Browser custom track) |
Alignm length: | 903 |
Alignm identity: | 616 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 14 |
Conread position: | 1-902 |
Cow position: | chr17:22552906-22552006 (view UCSC Genome Browser custom track) |
Alignm length: | 905 |
Alignm identity: | 605 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 21 |
Conread position: | 1-902 |
Cow position: | chr17:22590240-22589340 (view UCSC Genome Browser custom track) |
Alignm length: | 906 |
Alignm identity: | 596 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 7 |
Conread position: | 1-907 |
Cow position: | chr17:22552655-22551749 (view UCSC Genome Browser custom track) |
Alignm length: | 910 |
Alignm identity: | 611 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 288 |
Conread position: | 1-907 |
Cow position: | chr17:22552991-22552085 (view UCSC Genome Browser custom track) |
Alignm length: | 911 |
Alignm identity: | 618 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 197 |
Conread position: | 1-921 |
Cow position: | chr17:41441094-41440175 (view UCSC Genome Browser custom track) |
Alignm length: | 927 |
Alignm identity: | 555 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 221, 228 |
Conread position: | 19-855 |
Cow position: | chr17:22590055-22589219 (view UCSC Genome Browser custom track) |
Alignm length: | 839 |
Alignm identity: | 557 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 572, 578 |
Conread position: | 22-830 |
Cow position: | chr17:22552298-22551490 (view UCSC Genome Browser custom track) |
Alignm length: | 812 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 176 |
Conread position: | 25-764 |
Cow position: | chr17:22452412-22451673 (view UCSC Genome Browser custom track) |
Alignm length: | 743 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 26 |
Conread position: | 26-673 |
Cow position: | chr17:22473304-22473952 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 432, 411 |
Conread position: | 26-907 |
Cow position: | chr17:22590300-22589419 (view UCSC Genome Browser custom track) |
Alignm length: | 885 |
Alignm identity: | 587 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 181 |
Conread position: | 27-902 |
Cow position: | chr17:22553049-22552174 (view UCSC Genome Browser custom track) |
Alignm length: | 880 |
Alignm identity: | 579 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 82 |
Conread position: | 28-901 |
Cow position: | chr17:22552544-22551671 (view UCSC Genome Browser custom track) |
Alignm length: | 876 |
Alignm identity: | 598 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 497, 503 |
Conread position: | 28-902 |
Cow position: | chr17:22590130-22589256 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 582 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 329, 354 |
Conread position: | 34-757 |
Cow position: | chr17:22473231-22473952 (view UCSC Genome Browser custom track) |
Alignm length: | 727 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 19 |
Conread position: | 36-827 |
Cow position: | chr17:22499331-22498540 (view UCSC Genome Browser custom track) |
Alignm length: | 795 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 329, 316 |
Conread position: | 37-818 |
Cow position: | chr17:22452316-22451537 (view UCSC Genome Browser custom track) |
Alignm length: | 787 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 135 |
Conread position: | 54-907 |
Cow position: | chr17:22499397-22498544 (view UCSC Genome Browser custom track) |
Alignm length: | 856 |
Alignm identity: | 565 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 311 |
Conread position: | 55-907 |
Cow position: | chr17:22553105-22552253 (view UCSC Genome Browser custom track) |
Alignm length: | 861 |
Alignm identity: | 587 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 117 |
Conread position: | 56-903 |
Cow position: | chr17:44467440-44468287 (view UCSC Genome Browser custom track) |
Alignm length: | 850 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 632, 644 |
Conread position: | 78-907 |
Cow position: | chr17:22553166-22552337 (view UCSC Genome Browser custom track) |
Alignm length: | 834 |
Alignm identity: | 539 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 287 |
Conread position: | 112-844 |
Cow position: | chr17:22452409-22451677 (view UCSC Genome Browser custom track) |
Alignm length: | 734 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 153 |
Conread position: | 112-907 |
Cow position: | chr17:22499423-22498628 (view UCSC Genome Browser custom track) |
Alignm length: | 798 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 421, 408 |
Conread position: | 116-851 |
Cow position: | chr17:22473226-22473962 (view UCSC Genome Browser custom track) |
Alignm length: | 740 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 37 |
Conread position: | 133-823 |
Cow position: | chr17:44467685-44468375 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 394 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 387, 395 |
Conread position: | 140-907 |
Cow position: | chr17:44467440-44468207 (view UCSC Genome Browser custom track) |
Alignm length: | 772 |
Alignm identity: | 450 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 218, 225 |
Conread position: | 145-907 |
Cow position: | chr17:41441118-41440356 (view UCSC Genome Browser custom track) |
Alignm length: | 765 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 300 |
Conread position: | 216-903 |
Cow position: | chr17:22452389-22451702 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 557, 567 |
Conread position: | 217-907 |
Cow position: | chr17:44467433-44468123 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 405 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 555, 561 |
Conread position: | 220-907 |
Cow position: | chr17:22473249-22473934 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 463 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 678, 18 |
Conread position: | 223-915 |
Cow position: | chr17:22553105-22552414 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 479 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 143 |
Conread position: | 280-853 |
Cow position: | chr17:22452409-22451836 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 331-907 |
Cow position: | chr17:44467379-44467955 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 343 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 124, 114 |
Conread position: | 344-904 |
Cow position: | chr17:22452513-22451953 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 176 |
Conread position: | 371-902 |
Cow position: | chr17:22452402-22451871 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 16 |
Conread position: | 406-902 |
Cow position: | chr17:22553174-22552678 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 109 |
Conread position: | 532-907 |
Cow position: | chr17:22452409-22452034 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 22 |
Conread position: | 602-915 |
Cow position: | chr17:22590312-22590000 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 214 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 250, 260 |
Conread position: | 614-907 |
Cow position: | chr17:22452411-22452118 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 204 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.