Cow genome map
Conread name: | Ss1.1-rjej03b_m20.5 |
Conread position: | 1-321 |
Cow position: | chr19:20678486-20678802 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 203 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 120, 7 |
Conread position: | 1-396 |
Cow position: | chr19:14940690-14941085 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 196 |
Conread position: | 1-419 |
Cow position: | chr19:23597312-23597730 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 275 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 281, 7 |
Conread position: | 1-428 |
Cow position: | chr19:43570110-43569687 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 11 |
Conread position: | 1-500 |
Cow position: | chr19:20635519-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 191 |
Conread position: | 1-555 |
Cow position: | chr19:14940523-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 11 |
Conread position: | 1-651 |
Cow position: | chr19:23614470-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 519, 533 |
Conread position: | 1-716 |
Cow position: | chr19:14940354-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 509, 532 |
Conread position: | 1-732 |
Cow position: | chr19:14959538-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 700, 7 |
Conread position: | 1-819 |
Cow position: | chr19:23649668-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 821 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 173 |
Conread position: | 1-863 |
Cow position: | chr19:14940186-14941048 (view UCSC Genome Browser custom track) |
Alignm length: | 867 |
Alignm identity: | 591 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 171 |
Conread position: | 1-896 |
Cow position: | chr19:23649585-23650479 (view UCSC Genome Browser custom track) |
Alignm length: | 897 |
Alignm identity: | 596 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 13 |
Conread position: | 1-902 |
Cow position: | chr19:14940019-14940919 (view UCSC Genome Browser custom track) |
Alignm length: | 904 |
Alignm identity: | 621 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 7 |
Conread position: | 1-902 |
Cow position: | chr19:14960027-14959151 (view UCSC Genome Browser custom track) |
Alignm length: | 908 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 157 |
Conread position: | 1-902 |
Cow position: | chr19:23613630-23614531 (view UCSC Genome Browser custom track) |
Alignm length: | 904 |
Alignm identity: | 621 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 202 |
Conread position: | 1-904 |
Cow position: | chr19:23613799-23614701 (view UCSC Genome Browser custom track) |
Alignm length: | 911 |
Alignm identity: | 627 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 7 |
Conread position: | 1-907 |
Cow position: | chr19:20677646-20678551 (view UCSC Genome Browser custom track) |
Alignm length: | 911 |
Alignm identity: | 597 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 6 |
Conread position: | 1-907 |
Cow position: | chr19:20677730-20678635 (view UCSC Genome Browser custom track) |
Alignm length: | 915 |
Alignm identity: | 604 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 7 |
Conread position: | 1-907 |
Cow position: | chr19:23649501-23650406 (view UCSC Genome Browser custom track) |
Alignm length: | 907 |
Alignm identity: | 595 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 3-902 |
Cow position: | chr19:14960274-14959394 (view UCSC Genome Browser custom track) |
Alignm length: | 903 |
Alignm identity: | 601 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 9 |
Conread position: | 3-902 |
Cow position: | chr19:23613380-23614279 (view UCSC Genome Browser custom track) |
Alignm length: | 903 |
Alignm identity: | 608 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 170 |
Conread position: | 3-902 |
Cow position: | chr19:23613969-23614867 (view UCSC Genome Browser custom track) |
Alignm length: | 905 |
Alignm identity: | 605 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 5 |
Conread position: | 3-907 |
Cow position: | chr19:14959857-14958984 (view UCSC Genome Browser custom track) |
Alignm length: | 908 |
Alignm identity: | 572 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 45 |
Conread position: | 15-357 |
Cow position: | chr19:14948339-14947997 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 219 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 175, 193 |
Conread position: | 16-639 |
Cow position: | chr19:14940453-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 626 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 156 |
Conread position: | 18-439 |
Cow position: | chr19:14948419-14947999 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 19 |
Conread position: | 19-576 |
Cow position: | chr19:23597161-23597718 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 493, 503 |
Conread position: | 19-816 |
Cow position: | chr19:14959605-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 801 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 96 |
Conread position: | 19-907 |
Cow position: | chr19:14960343-14959473 (view UCSC Genome Browser custom track) |
Alignm length: | 890 |
Alignm identity: | 588 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 846, 193 |
Conread position: | 21-901 |
Cow position: | chr19:20677917-20678794 (view UCSC Genome Browser custom track) |
Alignm length: | 891 |
Alignm identity: | 575 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 81 |
Conread position: | 25-641 |
Cow position: | chr19:43570253-43569642 (view UCSC Genome Browser custom track) |
Alignm length: | 620 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 7 |
Conread position: | 26-752 |
Cow position: | chr19:23614411-23615135 (view UCSC Genome Browser custom track) |
Alignm length: | 731 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 144 |
Conread position: | 26-902 |
Cow position: | chr19:23613487-23614363 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 609 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 753, 740 |
Conread position: | 26-904 |
Cow position: | chr19:14959680-14958819 (view UCSC Genome Browser custom track) |
Alignm length: | 882 |
Alignm identity: | 573 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 29 |
Conread position: | 26-907 |
Cow position: | chr19:23614075-23614956 (view UCSC Genome Browser custom track) |
Alignm length: | 884 |
Alignm identity: | 582 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 673, 665 |
Conread position: | 27-902 |
Cow position: | chr19:23614244-23615117 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 583 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 148 |
Conread position: | 28-807 |
Cow position: | chr19:14940297-14941076 (view UCSC Genome Browser custom track) |
Alignm length: | 782 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 344, 334 |
Conread position: | 28-839 |
Cow position: | chr19:23596921-23597730 (view UCSC Genome Browser custom track) |
Alignm length: | 816 |
Alignm identity: | 549 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 112 |
Conread position: | 28-901 |
Cow position: | chr19:23649443-23650316 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 581 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 35-566 |
Cow position: | chr19:14916027-14916541 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 342 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 273, 102 |
Conread position: | 35-584 |
Cow position: | chr19:20635569-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 137 |
Conread position: | 35-907 |
Cow position: | chr19:14960411-14959557 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 574 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 818, 258 |
Conread position: | 36-902 |
Cow position: | chr19:23649283-23650149 (view UCSC Genome Browser custom track) |
Alignm length: | 872 |
Alignm identity: | 576 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 152 |
Conread position: | 36-907 |
Cow position: | chr19:23613749-23614620 (view UCSC Genome Browser custom track) |
Alignm length: | 876 |
Alignm identity: | 600 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 15 |
Conread position: | 36-907 |
Cow position: | chr19:23614169-23615040 (view UCSC Genome Browser custom track) |
Alignm length: | 880 |
Alignm identity: | 598 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 63 |
Conread position: | 37-904 |
Cow position: | chr19:14940138-14941005 (view UCSC Genome Browser custom track) |
Alignm length: | 870 |
Alignm identity: | 607 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 235 |
Conread position: | 37-907 |
Cow position: | chr19:23613582-23614452 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 598 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 329 |
Conread position: | 37-907 |
Cow position: | chr19:23613918-23614788 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 599 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 135 |
Conread position: | 42-741 |
Cow position: | chr19:20635646-20634950 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 449 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 239 |
Conread position: | 49-674 |
Cow position: | chr19:14915956-14916561 (view UCSC Genome Browser custom track) |
Alignm length: | 634 |
Alignm identity: | 400 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 50, 19 |
Conread position: | 49-904 |
Cow position: | chr19:20677441-20678296 (view UCSC Genome Browser custom track) |
Alignm length: | 858 |
Alignm identity: | 547 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 115 |
Conread position: | 53-909 |
Cow position: | chr19:14939985-14940841 (view UCSC Genome Browser custom track) |
Alignm length: | 859 |
Alignm identity: | 596 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 820 |
Conread position: | 58-902 |
Cow position: | chr19:23613351-23614195 (view UCSC Genome Browser custom track) |
Alignm length: | 847 |
Alignm identity: | 578 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 461, 470 |
Conread position: | 58-907 |
Cow position: | chr19:23649389-23650238 (view UCSC Genome Browser custom track) |
Alignm length: | 852 |
Alignm identity: | 575 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 210 |
Conread position: | 59-820 |
Cow position: | chr19:14960469-14959714 (view UCSC Genome Browser custom track) |
Alignm length: | 767 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 26 |
Conread position: | 59-907 |
Cow position: | chr19:23596868-23597713 (view UCSC Genome Browser custom track) |
Alignm length: | 853 |
Alignm identity: | 552 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 39 |
Conread position: | 68-893 |
Cow position: | chr19:43570452-43569642 (view UCSC Genome Browser custom track) |
Alignm length: | 829 |
Alignm identity: | 561 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 42 |
Conread position: | 120-596 |
Cow position: | chr19:14948485-14948009 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 76 |
Conread position: | 124-911 |
Cow position: | chr19:23596849-23597634 (view UCSC Genome Browser custom track) |
Alignm length: | 791 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 74 |
Conread position: | 126-907 |
Cow position: | chr19:23649289-23650070 (view UCSC Genome Browser custom track) |
Alignm length: | 784 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 46 |
Conread position: | 142-907 |
Cow position: | chr19:23613351-23614116 (view UCSC Genome Browser custom track) |
Alignm length: | 767 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 379, 389 |
Conread position: | 205-855 |
Cow position: | chr19:14960409-14959763 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 458 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 0 |
Conread position: | 205-907 |
Cow position: | chr19:20677431-20678131 (view UCSC Genome Browser custom track) |
Alignm length: | 707 |
Alignm identity: | 461 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 10 |
Conread position: | 216-902 |
Cow position: | chr19:20635640-20634957 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 466 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 65 |
Conread position: | 216-905 |
Cow position: | chr19:20677524-20678213 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 57 |
Conread position: | 220-907 |
Cow position: | chr19:20635720-20635033 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 22 |
Conread position: | 220-907 |
Cow position: | chr19:20677360-20678047 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 168 |
Conread position: | 225-907 |
Cow position: | chr19:23613350-23614032 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 238-902 |
Cow position: | chr19:43570450-43569797 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 43 |
Conread position: | 273-901 |
Cow position: | chr19:14960423-14959801 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 280-907 |
Cow position: | chr19:23596836-23597461 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 86 |
Conread position: | 288-763 |
Cow position: | chr19:14948485-14948011 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 308-902 |
Cow position: | chr19:14915962-14916541 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 380 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 54, 167 |
Conread position: | 384-869 |
Cow position: | chr19:14948471-14947989 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 388, 22 |
Conread position: | 392-859 |
Cow position: | chr19:14915962-14916426 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 166 |
Conread position: | 400-907 |
Cow position: | chr19:14960464-14959961 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 406-904 |
Cow position: | chr19:43570450-43569963 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 32 |
Conread position: | 416-904 |
Cow position: | chr19:20677307-20677792 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 304 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 440, 52 |
Conread position: | 457-904 |
Cow position: | chr19:14948484-14948038 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 76 |
Conread position: | 540-907 |
Cow position: | chr19:23649283-23649650 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 325, 329 |
Conread position: | 547-907 |
Cow position: | chr19:43570394-43570044 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 237 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 557-907 |
Cow position: | chr19:14960477-14960129 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 233 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 318, 0 |
Conread position: | 629-907 |
Cow position: | chr19:14948480-14948203 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 187 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 688-893 |
Cow position: | chr19:23596825-23597030 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 138 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.